Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AL596087.1-201ENST00000400979 1969 ntBASIC16.81■□□□□ 0.28
VARS2Q5ST30 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.81■□□□□ 0.28
VARS2Q5ST30 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VARS2Q5ST30 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.81■□□□□ 0.28
VARS2Q5ST30 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.81■□□□□ 0.28
VARS2Q5ST30 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.81■□□□□ 0.28
VARS2Q5ST30 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.81■□□□□ 0.28
VARS2Q5ST30 AL079304.1-201ENST00000554595 828 ntTSL 2 BASIC16.81■□□□□ 0.28
VARS2Q5ST30 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.81■□□□□ 0.28
VARS2Q5ST30 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.81■□□□□ 0.28
VARS2Q5ST30 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.81■□□□□ 0.28
VARS2Q5ST30 AC027281.2-201ENST00000623856 713 ntBASIC16.81■□□□□ 0.28
VARS2Q5ST30 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.81■□□□□ 0.28
VARS2Q5ST30 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.81■□□□□ 0.28
VARS2Q5ST30 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VARS2Q5ST30 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.81■□□□□ 0.28
VARS2Q5ST30 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VARS2Q5ST30 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VARS2Q5ST30 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VARS2Q5ST30 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.81■□□□□ 0.28
VARS2Q5ST30 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VARS2Q5ST30 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
VARS2Q5ST30 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VARS2Q5ST30 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
VARS2Q5ST30 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VARS2Q5ST30 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
VARS2Q5ST30 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VARS2Q5ST30 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VARS2Q5ST30 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.8■□□□□ 0.28
VARS2Q5ST30 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.8■□□□□ 0.28
VARS2Q5ST30 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
VARS2Q5ST30 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.8■□□□□ 0.28
VARS2Q5ST30 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.8■□□□□ 0.28
VARS2Q5ST30 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VARS2Q5ST30 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.8■□□□□ 0.28
VARS2Q5ST30 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VARS2Q5ST30 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VARS2Q5ST30 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VARS2Q5ST30 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VARS2Q5ST30 AL691447.1-201ENST00000419456 387 ntBASIC16.8■□□□□ 0.28
VARS2Q5ST30 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.8■□□□□ 0.28
VARS2Q5ST30 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.8■□□□□ 0.28
VARS2Q5ST30 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.8■□□□□ 0.28
VARS2Q5ST30 AC092658.1-201ENST00000505836 891 ntBASIC16.8■□□□□ 0.28
VARS2Q5ST30 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.8■□□□□ 0.28
VARS2Q5ST30 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.8■□□□□ 0.28
VARS2Q5ST30 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.8■□□□□ 0.28
VARS2Q5ST30 RAB43P1-201ENST00000561790 589 ntBASIC16.8■□□□□ 0.28
VARS2Q5ST30 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VARS2Q5ST30 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VARS2Q5ST30 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.8■□□□□ 0.28
VARS2Q5ST30 BRI3BPP1-201ENST00000594224 787 ntBASIC16.8■□□□□ 0.28
VARS2Q5ST30 AC010319.3-201ENST00000597028 470 ntBASIC16.8■□□□□ 0.28
VARS2Q5ST30 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.8■□□□□ 0.28
VARS2Q5ST30 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VARS2Q5ST30 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
VARS2Q5ST30 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VARS2Q5ST30 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VARS2Q5ST30 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VARS2Q5ST30 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.8■□□□□ 0.28
VARS2Q5ST30 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.8■□□□□ 0.28
VARS2Q5ST30 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.8■□□□□ 0.28
VARS2Q5ST30 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VARS2Q5ST30 AC011477.6-201ENST00000604980 1927 ntBASIC16.8■□□□□ 0.28
VARS2Q5ST30 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
VARS2Q5ST30 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VARS2Q5ST30 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VARS2Q5ST30 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VARS2Q5ST30 AL139384.1-201ENST00000612143 3047 ntBASIC16.8■□□□□ 0.28
VARS2Q5ST30 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VARS2Q5ST30 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VARS2Q5ST30 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VARS2Q5ST30 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.79■□□□□ 0.28
VARS2Q5ST30 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
VARS2Q5ST30 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.79■□□□□ 0.28
VARS2Q5ST30 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.79■□□□□ 0.28
VARS2Q5ST30 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VARS2Q5ST30 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VARS2Q5ST30 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VARS2Q5ST30 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
VARS2Q5ST30 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARS2Q5ST30 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARS2Q5ST30 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARS2Q5ST30 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VARS2Q5ST30 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
VARS2Q5ST30 AP000568.1-201ENST00000282964 442 ntBASIC16.79■□□□□ 0.28
VARS2Q5ST30 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARS2Q5ST30 MIR658-201ENST00000385210 100 ntBASIC16.79■□□□□ 0.28
VARS2Q5ST30 SMIM11A-201ENST00000399292 850 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARS2Q5ST30 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VARS2Q5ST30 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.79■□□□□ 0.28
VARS2Q5ST30 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
VARS2Q5ST30 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC16.79■□□□□ 0.28
VARS2Q5ST30 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VARS2Q5ST30 AC008735.3-201ENST00000596646 500 ntBASIC16.79■□□□□ 0.28
VARS2Q5ST30 AC133539.2-201ENST00000604757 467 ntBASIC16.79■□□□□ 0.28
VARS2Q5ST30 RPSAP52-203ENST00000622976 1023 ntBASIC16.79■□□□□ 0.28
VARS2Q5ST30 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARS2Q5ST30 MTHFR-217ENST00000641820 1569 ntBASIC16.79■□□□□ 0.28
VARS2Q5ST30 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms