Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 AL607033.1-201ENST00000623900 1599 ntBASIC19.42■□□□□ 0.7
CCDC93Q567U6 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC93Q567U6 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC93Q567U6 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC93Q567U6 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC93Q567U6 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC93Q567U6 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC93Q567U6 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC93Q567U6 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC93Q567U6 Z93015.1-201ENST00000451718 390 ntBASIC19.42■□□□□ 0.7
CCDC93Q567U6 AC104306.2-201ENST00000451877 341 ntBASIC19.42■□□□□ 0.7
CCDC93Q567U6 POU5F1P6-201ENST00000466990 990 ntBASIC19.42■□□□□ 0.7
CCDC93Q567U6 ARTN-209ENST00000479128 471 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC93Q567U6 PARP8-206ENST00000503665 572 ntTSL 4 BASIC19.42■□□□□ 0.7
CCDC93Q567U6 AHRR-211ENST00000515206 462 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC93Q567U6 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC93Q567U6 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC93Q567U6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.42■□□□□ 0.7
CCDC93Q567U6 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC93Q567U6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC93Q567U6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC93Q567U6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC93Q567U6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CCDC93Q567U6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC93Q567U6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC93Q567U6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC93Q567U6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CCDC93Q567U6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC93Q567U6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC93Q567U6 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.41■□□□□ 0.7
CCDC93Q567U6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC93Q567U6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC93Q567U6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC93Q567U6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC93Q567U6 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC93Q567U6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC93Q567U6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC93Q567U6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC93Q567U6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC93Q567U6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC93Q567U6 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC93Q567U6 ACKR1-201ENST00000368121 1240 ntBASIC19.41■□□□□ 0.7
CCDC93Q567U6 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC93Q567U6 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC93Q567U6 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC93Q567U6 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC93Q567U6 OARD1-212ENST00000482515 832 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC93Q567U6 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC93Q567U6 COG4-212ENST00000564653 590 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC93Q567U6 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC93Q567U6 AC000095.1-201ENST00000603208 874 ntBASIC19.41■□□□□ 0.7
CCDC93Q567U6 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC19.41■□□□□ 0.7
CCDC93Q567U6 AL021578.1-201ENST00000613646 709 ntBASIC19.41■□□□□ 0.7
CCDC93Q567U6 PRKN-211ENST00000615065 261 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC93Q567U6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC93Q567U6 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC93Q567U6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC93Q567U6 AC008894.3-201ENST00000624324 3103 ntBASIC19.41■□□□□ 0.7
CCDC93Q567U6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
CCDC93Q567U6 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC93Q567U6 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC93Q567U6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC93Q567U6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC93Q567U6 AGER-206ENST00000375070 1463 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC93Q567U6 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC93Q567U6 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC93Q567U6 AL592424.1-201ENST00000563624 1536 ntBASIC19.41■□□□□ 0.7
CCDC93Q567U6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC93Q567U6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC93Q567U6 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CCDC93Q567U6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC93Q567U6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC93Q567U6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC93Q567U6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC93Q567U6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC93Q567U6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC93Q567U6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCDC93Q567U6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC93Q567U6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
CCDC93Q567U6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC93Q567U6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC93Q567U6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CCDC93Q567U6 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC93Q567U6 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CCDC93Q567U6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC93Q567U6 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC93Q567U6 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC93Q567U6 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CCDC93Q567U6 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.4■□□□□ 0.7
CCDC93Q567U6 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCDC93Q567U6 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC19.4■□□□□ 0.7
CCDC93Q567U6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCDC93Q567U6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC93Q567U6 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC93Q567U6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC93Q567U6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC93Q567U6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
CCDC93Q567U6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC93Q567U6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC93Q567U6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms