Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC234783.1-201ENST00000441761 496 ntBASIC18.89■□□□□ 0.61
PDS5AQ29RF7 AC012441.1-201ENST00000446669 685 ntBASIC18.89■□□□□ 0.61
PDS5AQ29RF7 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
PDS5AQ29RF7 AP001889.1-201ENST00000525414 633 ntBASIC18.89■□□□□ 0.61
PDS5AQ29RF7 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.89■□□□□ 0.61
PDS5AQ29RF7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDS5AQ29RF7 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.89■□□□□ 0.61
PDS5AQ29RF7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDS5AQ29RF7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.89■□□□□ 0.61
PDS5AQ29RF7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDS5AQ29RF7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDS5AQ29RF7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PDS5AQ29RF7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDS5AQ29RF7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 AC022137.2-201ENST00000503482 481 ntBASIC18.88■□□□□ 0.61
PDS5AQ29RF7 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDS5AQ29RF7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 AL022328.1-201ENST00000610050 478 ntBASIC18.87■□□□□ 0.61
PDS5AQ29RF7 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.87■□□□□ 0.61
PDS5AQ29RF7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 BAATP1-201ENST00000412284 1225 ntBASIC18.86■□□□□ 0.61
PDS5AQ29RF7 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PDS5AQ29RF7 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms