Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC19.48■□□□□ 0.71
DDR1Q08345 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC19.48■□□□□ 0.71
DDR1Q08345 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
DDR1Q08345 SPCS2P2-201ENST00000603270 608 ntBASIC19.48■□□□□ 0.71
DDR1Q08345 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
DDR1Q08345 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDR1Q08345 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDR1Q08345 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
DDR1Q08345 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DDR1Q08345 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
DDR1Q08345 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDR1Q08345 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDR1Q08345 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.47■□□□□ 0.71
DDR1Q08345 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDR1Q08345 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDR1Q08345 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDR1Q08345 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDR1Q08345 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDR1Q08345 SDCCAG3P2-201ENST00000326105 1023 ntBASIC19.47■□□□□ 0.71
DDR1Q08345 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
DDR1Q08345 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDR1Q08345 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC19.47■□□□□ 0.71
DDR1Q08345 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DDR1Q08345 SPTLC1P5-201ENST00000450718 252 ntBASIC19.47■□□□□ 0.71
DDR1Q08345 RPS2P36-201ENST00000456516 831 ntBASIC19.47■□□□□ 0.71
DDR1Q08345 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC19.47■□□□□ 0.71
DDR1Q08345 AC044849.1-201ENST00000519737 1188 ntBASIC19.47■□□□□ 0.71
DDR1Q08345 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC19.47■□□□□ 0.71
DDR1Q08345 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
DDR1Q08345 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC19.47■□□□□ 0.71
DDR1Q08345 RN7SL48P-201ENST00000579283 293 ntBASIC19.47■□□□□ 0.71
DDR1Q08345 UBL5-208ENST00000593087 320 ntTSL 3 BASIC19.47■□□□□ 0.71
DDR1Q08345 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DDR1Q08345 AC128714.1-201ENST00000637035 887 ntBASIC19.47■□□□□ 0.71
DDR1Q08345 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DDR1Q08345 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DDR1Q08345 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
DDR1Q08345 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDR1Q08345 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
DDR1Q08345 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDR1Q08345 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDR1Q08345 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DDR1Q08345 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDR1Q08345 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDR1Q08345 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
DDR1Q08345 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDR1Q08345 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDR1Q08345 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDR1Q08345 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDR1Q08345 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC19.46■□□□□ 0.71
DDR1Q08345 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC19.46■□□□□ 0.71
DDR1Q08345 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDR1Q08345 MIR33B-201ENST00000385104 96 ntBASIC19.46■□□□□ 0.71
DDR1Q08345 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC19.46■□□□□ 0.71
DDR1Q08345 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDR1Q08345 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDR1Q08345 PTPA-217ENST00000434095 870 ntTSL 2 BASIC19.46■□□□□ 0.71
DDR1Q08345 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC19.46■□□□□ 0.71
DDR1Q08345 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
DDR1Q08345 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDR1Q08345 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC19.46■□□□□ 0.71
DDR1Q08345 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC19.46■□□□□ 0.71
DDR1Q08345 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC19.46■□□□□ 0.71
DDR1Q08345 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.46■□□□□ 0.71
DDR1Q08345 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.46■□□□□ 0.71
DDR1Q08345 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.46■□□□□ 0.71
DDR1Q08345 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.46■□□□□ 0.71
DDR1Q08345 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDR1Q08345 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
DDR1Q08345 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC19.46■□□□□ 0.71
DDR1Q08345 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
DDR1Q08345 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
DDR1Q08345 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
DDR1Q08345 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDR1Q08345 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
DDR1Q08345 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDR1Q08345 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
DDR1Q08345 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.45■□□□□ 0.7
DDR1Q08345 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDR1Q08345 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
DDR1Q08345 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDR1Q08345 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC19.45■□□□□ 0.7
DDR1Q08345 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.45■□□□□ 0.7
DDR1Q08345 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
DDR1Q08345 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
DDR1Q08345 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC19.45■□□□□ 0.7
DDR1Q08345 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC19.45■□□□□ 0.7
DDR1Q08345 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDR1Q08345 SDHD-202ENST00000525291 790 ntTSL 3 BASIC19.45■□□□□ 0.7
DDR1Q08345 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.45■□□□□ 0.7
DDR1Q08345 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC19.45■□□□□ 0.7
DDR1Q08345 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDR1Q08345 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC19.45■□□□□ 0.7
DDR1Q08345 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC19.45■□□□□ 0.7
DDR1Q08345 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.45■□□□□ 0.7
DDR1Q08345 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDR1Q08345 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDR1Q08345 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
DDR1Q08345 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
DDR1Q08345 AC092171.3-201ENST00000610122 2651 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms