Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCN7AQ01118 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SCN7AQ01118 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.38■□□□□ 0.69
SCN7AQ01118 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCN7AQ01118 AC016700.1-201ENST00000429424 312 ntBASIC19.38■□□□□ 0.69
SCN7AQ01118 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC19.38■□□□□ 0.69
SCN7AQ01118 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC19.38■□□□□ 0.69
SCN7AQ01118 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCN7AQ01118 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC19.38■□□□□ 0.69
SCN7AQ01118 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC19.38■□□□□ 0.69
SCN7AQ01118 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC19.38■□□□□ 0.69
SCN7AQ01118 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC19.38■□□□□ 0.69
SCN7AQ01118 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC19.38■□□□□ 0.69
SCN7AQ01118 NKG7-204ENST00000595217 816 ntTSL 2 BASIC19.38■□□□□ 0.69
SCN7AQ01118 AC097724.1-201ENST00000609581 426 ntBASIC19.38■□□□□ 0.69
SCN7AQ01118 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC19.38■□□□□ 0.69
SCN7AQ01118 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SCN7AQ01118 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCN7AQ01118 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCN7AQ01118 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCN7AQ01118 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCN7AQ01118 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCN7AQ01118 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCN7AQ01118 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SCN7AQ01118 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCN7AQ01118 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCN7AQ01118 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCN7AQ01118 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.38■□□□□ 0.69
SCN7AQ01118 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN7AQ01118 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.37■□□□□ 0.69
SCN7AQ01118 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.37■□□□□ 0.69
SCN7AQ01118 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC19.37■□□□□ 0.69
SCN7AQ01118 FXNP2-201ENST00000411625 547 ntBASIC19.37■□□□□ 0.69
SCN7AQ01118 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN7AQ01118 AC005077.2-201ENST00000449786 690 ntBASIC19.37■□□□□ 0.69
SCN7AQ01118 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC19.37■□□□□ 0.69
SCN7AQ01118 AC022217.1-201ENST00000521069 738 ntBASIC19.37■□□□□ 0.69
SCN7AQ01118 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC19.37■□□□□ 0.69
SCN7AQ01118 MIR3619-201ENST00000579667 83 ntBASIC19.37■□□□□ 0.69
SCN7AQ01118 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19.37■□□□□ 0.69
SCN7AQ01118 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC19.37■□□□□ 0.69
SCN7AQ01118 AP001505.2-201ENST00000616815 443 ntBASIC19.37■□□□□ 0.69
SCN7AQ01118 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC19.37■□□□□ 0.69
SCN7AQ01118 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC19.37■□□□□ 0.69
SCN7AQ01118 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN7AQ01118 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN7AQ01118 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.37■□□□□ 0.69
SCN7AQ01118 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.37■□□□□ 0.69
SCN7AQ01118 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN7AQ01118 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN7AQ01118 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.37■□□□□ 0.69
SCN7AQ01118 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC19.37■□□□□ 0.69
SCN7AQ01118 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN7AQ01118 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC19.37■□□□□ 0.69
SCN7AQ01118 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC19.37■□□□□ 0.69
SCN7AQ01118 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCN7AQ01118 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCN7AQ01118 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SCN7AQ01118 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.37■□□□□ 0.69
SCN7AQ01118 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.37■□□□□ 0.69
SCN7AQ01118 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.37■□□□□ 0.69
SCN7AQ01118 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCN7AQ01118 AC104457.1-201ENST00000401024 814 ntBASIC19.36■□□□□ 0.69
SCN7AQ01118 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC19.36■□□□□ 0.69
SCN7AQ01118 PTPA-218ENST00000435132 618 ntTSL 2 BASIC19.36■□□□□ 0.69
SCN7AQ01118 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC19.36■□□□□ 0.69
SCN7AQ01118 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
SCN7AQ01118 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC19.36■□□□□ 0.69
SCN7AQ01118 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC19.36■□□□□ 0.69
SCN7AQ01118 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCN7AQ01118 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC19.36■□□□□ 0.69
SCN7AQ01118 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SCN7AQ01118 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN7AQ01118 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCN7AQ01118 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SCN7AQ01118 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCN7AQ01118 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN7AQ01118 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN7AQ01118 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN7AQ01118 AC084364.1-201ENST00000551967 1556 ntBASIC19.36■□□□□ 0.69
SCN7AQ01118 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SCN7AQ01118 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN7AQ01118 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN7AQ01118 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN7AQ01118 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN7AQ01118 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SCN7AQ01118 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN7AQ01118 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.36■□□□□ 0.69
SCN7AQ01118 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCN7AQ01118 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCN7AQ01118 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN7AQ01118 LSM5-207ENST00000410044 687 ntTSL 3 BASIC19.36■□□□□ 0.69
SCN7AQ01118 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC19.36■□□□□ 0.69
SCN7AQ01118 UPF3AP2-201ENST00000457924 1132 ntBASIC19.36■□□□□ 0.69
SCN7AQ01118 PFN2-205ENST00000461868 613 ntTSL 2 BASIC19.36■□□□□ 0.69
SCN7AQ01118 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN7AQ01118 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC19.36■□□□□ 0.69
SCN7AQ01118 NAT9-222ENST00000583476 583 ntTSL 3 BASIC19.36■□□□□ 0.69
SCN7AQ01118 AC106820.2-201ENST00000563775 3264 ntBASIC19.36■□□□□ 0.69
SCN7AQ01118 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms