Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 CNN2P8-201ENST00000421872 913 ntBASIC17.97■□□□□ 0.47
CCNA1P78396 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCNA1P78396 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.97■□□□□ 0.47
CCNA1P78396 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.97■□□□□ 0.47
CCNA1P78396 KRT18P25-201ENST00000508931 1278 ntBASIC17.97■□□□□ 0.47
CCNA1P78396 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.97■□□□□ 0.47
CCNA1P78396 AP001582.1-201ENST00000525856 295 ntBASIC17.97■□□□□ 0.47
CCNA1P78396 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.97■□□□□ 0.47
CCNA1P78396 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.97■□□□□ 0.47
CCNA1P78396 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCNA1P78396 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.97■□□□□ 0.47
CCNA1P78396 GNRHR2-203ENST00000581100 1187 ntBASIC17.97■□□□□ 0.47
CCNA1P78396 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.97■□□□□ 0.47
CCNA1P78396 AC107373.2-201ENST00000607735 490 ntBASIC17.97■□□□□ 0.47
CCNA1P78396 AC091271.1-201ENST00000611877 1162 ntBASIC17.97■□□□□ 0.47
CCNA1P78396 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.97■□□□□ 0.47
CCNA1P78396 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CCNA1P78396 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCNA1P78396 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
CCNA1P78396 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCNA1P78396 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CCNA1P78396 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCNA1P78396 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.96■□□□□ 0.47
CCNA1P78396 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCNA1P78396 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCNA1P78396 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCNA1P78396 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.96■□□□□ 0.47
CCNA1P78396 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCNA1P78396 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.96■□□□□ 0.47
CCNA1P78396 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCNA1P78396 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.96■□□□□ 0.47
CCNA1P78396 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.96■□□□□ 0.47
CCNA1P78396 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.96■□□□□ 0.47
CCNA1P78396 AC068587.10-201ENST00000641210 219 ntBASIC17.96■□□□□ 0.47
CCNA1P78396 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCNA1P78396 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
CCNA1P78396 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCNA1P78396 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCNA1P78396 AC005052.1-201ENST00000625181 2492 ntBASIC17.96■□□□□ 0.47
CCNA1P78396 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCNA1P78396 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCNA1P78396 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.96■□□□□ 0.47
CCNA1P78396 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.96■□□□□ 0.47
CCNA1P78396 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCNA1P78396 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.46
CCNA1P78396 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCNA1P78396 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.95■□□□□ 0.46
CCNA1P78396 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.95■□□□□ 0.46
CCNA1P78396 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.95■□□□□ 0.46
CCNA1P78396 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCNA1P78396 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCNA1P78396 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCNA1P78396 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.95■□□□□ 0.46
CCNA1P78396 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCNA1P78396 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCNA1P78396 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCNA1P78396 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.95■□□□□ 0.46
CCNA1P78396 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCNA1P78396 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCNA1P78396 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCNA1P78396 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCNA1P78396 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCNA1P78396 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCNA1P78396 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.95■□□□□ 0.46
CCNA1P78396 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CCNA1P78396 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.95■□□□□ 0.46
CCNA1P78396 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCNA1P78396 AC025279.2-201ENST00000569730 653 ntBASIC17.95■□□□□ 0.46
CCNA1P78396 AC015910.1-201ENST00000579400 975 ntBASIC17.95■□□□□ 0.46
CCNA1P78396 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.95■□□□□ 0.46
CCNA1P78396 AP005019.2-201ENST00000615104 511 ntBASIC17.95■□□□□ 0.46
CCNA1P78396 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCNA1P78396 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.95■□□□□ 0.46
CCNA1P78396 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCNA1P78396 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.95■□□□□ 0.46
CCNA1P78396 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCNA1P78396 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.95■□□□□ 0.46
CCNA1P78396 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCNA1P78396 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCNA1P78396 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CCNA1P78396 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.95■□□□□ 0.46
CCNA1P78396 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.95■□□□□ 0.46
CCNA1P78396 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCNA1P78396 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.94■□□□□ 0.46
CCNA1P78396 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CCNA1P78396 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCNA1P78396 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCNA1P78396 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCNA1P78396 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCNA1P78396 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.94■□□□□ 0.46
CCNA1P78396 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCNA1P78396 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.94■□□□□ 0.46
CCNA1P78396 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
CCNA1P78396 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCNA1P78396 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCNA1P78396 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCNA1P78396 MIR1247-201ENST00000408206 136 ntBASIC17.94■□□□□ 0.46
CCNA1P78396 GPAA1P2-201ENST00000417923 928 ntBASIC17.94■□□□□ 0.46
CCNA1P78396 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCNA1P78396 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms