Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC007191.1-201ENST00000623179 2995 ntBASIC11.33□□□□□ -0.6
RPL39P62891 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RPL39P62891 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
RPL39P62891 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
RPL39P62891 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
RPL39P62891 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
RPL39P62891 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RPL39P62891 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC11.33□□□□□ -0.6
RPL39P62891 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC11.33□□□□□ -0.6
RPL39P62891 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RPL39P62891 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
RPL39P62891 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC11.32□□□□□ -0.6
RPL39P62891 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
RPL39P62891 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC11.32□□□□□ -0.6
RPL39P62891 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC11.32□□□□□ -0.6
RPL39P62891 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
RPL39P62891 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC11.32□□□□□ -0.6
RPL39P62891 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC11.32□□□□□ -0.6
RPL39P62891 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC11.32□□□□□ -0.6
RPL39P62891 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 VMO1-203ENST00000416307 712 ntTSL 2 BASIC11.32□□□□□ -0.6
RPL39P62891 RBM17P3-201ENST00000417687 1192 ntBASIC11.32□□□□□ -0.6
RPL39P62891 PCED1CP-201ENST00000419887 785 ntBASIC11.32□□□□□ -0.6
RPL39P62891 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC11.32□□□□□ -0.6
RPL39P62891 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
RPL39P62891 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC11.32□□□□□ -0.6
RPL39P62891 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC11.32□□□□□ -0.6
RPL39P62891 MMP17-203ENST00000535004 719 ntTSL 3 BASIC11.32□□□□□ -0.6
RPL39P62891 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC11.32□□□□□ -0.6
RPL39P62891 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC11.32□□□□□ -0.6
RPL39P62891 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC11.32□□□□□ -0.6
RPL39P62891 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC11.32□□□□□ -0.6
RPL39P62891 IGHV3OR16-7-201ENST00000604106 360 ntBASIC11.32□□□□□ -0.6
RPL39P62891 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC11.32□□□□□ -0.6
RPL39P62891 GGTLC5P-201ENST00000617623 998 ntBASIC11.32□□□□□ -0.6
RPL39P62891 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC11.32□□□□□ -0.6
RPL39P62891 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
RPL39P62891 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC11.32□□□□□ -0.6
RPL39P62891 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC11.32□□□□□ -0.6
RPL39P62891 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC11.32□□□□□ -0.6
RPL39P62891 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 AC232323.1-201ENST00000540724 2099 ntBASIC11.32□□□□□ -0.6
RPL39P62891 REXO1L5P-201ENST00000622260 2098 ntBASIC11.32□□□□□ -0.6
RPL39P62891 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC11.32□□□□□ -0.6
RPL39P62891 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC11.32□□□□□ -0.6
RPL39P62891 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.32□□□□□ -0.6
RPL39P62891 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL39P62891 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC11.32□□□□□ -0.6
RPL39P62891 AC013726.1-201ENST00000563747 2285 ntBASIC11.32□□□□□ -0.6
RPL39P62891 CYP51A1P2-201ENST00000419457 1499 ntBASIC11.32□□□□□ -0.6
RPL39P62891 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
RPL39P62891 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RPL39P62891 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
RPL39P62891 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RPL39P62891 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC11.31□□□□□ -0.6
RPL39P62891 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC11.31□□□□□ -0.6
RPL39P62891 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RPL39P62891 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RPL39P62891 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RPL39P62891 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RPL39P62891 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RPL39P62891 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC11.31□□□□□ -0.6
RPL39P62891 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RPL39P62891 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RPL39P62891 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RPL39P62891 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
RPL39P62891 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RPL39P62891 CD99-202ENST00000381180 530 ntTSL 2 BASIC11.31□□□□□ -0.6
RPL39P62891 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC11.31□□□□□ -0.6
RPL39P62891 TMPOP1-202ENST00000424642 1267 ntBASIC11.31□□□□□ -0.6
RPL39P62891 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
RPL39P62891 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC11.31□□□□□ -0.6
RPL39P62891 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RPL39P62891 SART3-203ENST00000546611 1184 ntBASIC11.31□□□□□ -0.6
RPL39P62891 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms