Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC61A1P61619 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SEC61A1P61619 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SEC61A1P61619 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC61A1P61619 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SEC61A1P61619 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.03□□□□□ -0.16
SEC61A1P61619 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC61A1P61619 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC61A1P61619 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC61A1P61619 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC61A1P61619 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SEC61A1P61619 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SEC61A1P61619 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.03□□□□□ -0.16
SEC61A1P61619 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC61A1P61619 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC61A1P61619 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SEC61A1P61619 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SEC61A1P61619 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC61A1P61619 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC61A1P61619 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.03□□□□□ -0.16
SEC61A1P61619 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
SEC61A1P61619 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.03□□□□□ -0.16
SEC61A1P61619 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.03□□□□□ -0.16
SEC61A1P61619 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.03□□□□□ -0.16
SEC61A1P61619 AP006288.1-201ENST00000446065 395 ntBASIC14.03□□□□□ -0.16
SEC61A1P61619 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.03□□□□□ -0.16
SEC61A1P61619 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.03□□□□□ -0.16
SEC61A1P61619 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.03□□□□□ -0.16
SEC61A1P61619 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.03□□□□□ -0.16
SEC61A1P61619 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.03□□□□□ -0.16
SEC61A1P61619 AC092902.6-201ENST00000641783 218 ntBASIC14.03□□□□□ -0.16
SEC61A1P61619 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC61A1P61619 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SEC61A1P61619 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.03□□□□□ -0.16
SEC61A1P61619 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.03□□□□□ -0.16
SEC61A1P61619 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.03□□□□□ -0.16
SEC61A1P61619 GRK6P1-201ENST00000400595 1711 ntBASIC14.03□□□□□ -0.16
SEC61A1P61619 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.03□□□□□ -0.16
SEC61A1P61619 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC61A1P61619 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SEC61A1P61619 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
SEC61A1P61619 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.03□□□□□ -0.16
SEC61A1P61619 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC61A1P61619 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.03□□□□□ -0.16
SEC61A1P61619 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC61A1P61619 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC61A1P61619 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SEC61A1P61619 AC005089.1-201ENST00000619486 2241 ntBASIC14.03□□□□□ -0.16
SEC61A1P61619 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SEC61A1P61619 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.03□□□□□ -0.16
SEC61A1P61619 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SEC61A1P61619 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.03□□□□□ -0.16
SEC61A1P61619 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.03□□□□□ -0.16
SEC61A1P61619 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SEC61A1P61619 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC61A1P61619 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC61A1P61619 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.03□□□□□ -0.16
SEC61A1P61619 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC61A1P61619 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC61A1P61619 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC61A1P61619 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SEC61A1P61619 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC61A1P61619 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SEC61A1P61619 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC61A1P61619 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.02□□□□□ -0.16
SEC61A1P61619 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC61A1P61619 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SEC61A1P61619 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SEC61A1P61619 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.02□□□□□ -0.16
SEC61A1P61619 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.02□□□□□ -0.16
SEC61A1P61619 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SEC61A1P61619 SLC22A20-204ENST00000530038 1673 ntBASIC14.02□□□□□ -0.16
SEC61A1P61619 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.02□□□□□ -0.16
SEC61A1P61619 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.02□□□□□ -0.16
SEC61A1P61619 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC61A1P61619 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SEC61A1P61619 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SEC61A1P61619 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.02□□□□□ -0.16
SEC61A1P61619 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC61A1P61619 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC61A1P61619 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SEC61A1P61619 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SEC61A1P61619 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SEC61A1P61619 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SEC61A1P61619 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.02□□□□□ -0.17
SEC61A1P61619 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.02□□□□□ -0.17
SEC61A1P61619 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SEC61A1P61619 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SEC61A1P61619 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.02□□□□□ -0.17
SEC61A1P61619 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SEC61A1P61619 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SEC61A1P61619 AC005412.3-201ENST00000580309 715 ntBASIC14.02□□□□□ -0.17
SEC61A1P61619 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.02□□□□□ -0.17
SEC61A1P61619 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.02□□□□□ -0.17
SEC61A1P61619 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SEC61A1P61619 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SEC61A1P61619 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SEC61A1P61619 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.02□□□□□ -0.17
SEC61A1P61619 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SEC61A1P61619 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms