Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RIPK4P57078 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC20.76■□□□□ 0.91
RIPK4P57078 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RIPK4P57078 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RIPK4P57078 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RIPK4P57078 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RIPK4P57078 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RIPK4P57078 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RIPK4P57078 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC20.76■□□□□ 0.91
RIPK4P57078 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RIPK4P57078 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RIPK4P57078 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RIPK4P57078 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RIPK4P57078 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RIPK4P57078 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC20.76■□□□□ 0.91
RIPK4P57078 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC20.76■□□□□ 0.91
RIPK4P57078 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC20.76■□□□□ 0.91
RIPK4P57078 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RIPK4P57078 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC20.76■□□□□ 0.91
RIPK4P57078 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RIPK4P57078 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RIPK4P57078 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
RIPK4P57078 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC20.76■□□□□ 0.91
RIPK4P57078 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RIPK4P57078 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC20.76■□□□□ 0.91
RIPK4P57078 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RIPK4P57078 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RIPK4P57078 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RIPK4P57078 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RIPK4P57078 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
RIPK4P57078 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RIPK4P57078 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RIPK4P57078 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIPK4P57078 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIPK4P57078 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RIPK4P57078 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIPK4P57078 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIPK4P57078 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RIPK4P57078 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC20.75■□□□□ 0.91
RIPK4P57078 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
RIPK4P57078 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RIPK4P57078 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIPK4P57078 AC015922.1-201ENST00000421102 1152 ntBASIC20.75■□□□□ 0.91
RIPK4P57078 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC20.75■□□□□ 0.91
RIPK4P57078 CRB3P1-201ENST00000449338 276 ntBASIC20.75■□□□□ 0.91
RIPK4P57078 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIPK4P57078 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC20.75■□□□□ 0.91
RIPK4P57078 CHCHD2P3-201ENST00000603038 451 ntBASIC20.75■□□□□ 0.91
RIPK4P57078 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIPK4P57078 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RIPK4P57078 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIPK4P57078 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RIPK4P57078 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RIPK4P57078 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIPK4P57078 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC20.75■□□□□ 0.91
RIPK4P57078 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RIPK4P57078 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RIPK4P57078 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RIPK4P57078 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RIPK4P57078 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC20.75■□□□□ 0.91
RIPK4P57078 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.75■□□□□ 0.91
RIPK4P57078 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC20.75■□□□□ 0.91
RIPK4P57078 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIPK4P57078 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIPK4P57078 AP005117.1-202ENST00000581724 1908 ntBASIC20.74■□□□□ 0.91
RIPK4P57078 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RIPK4P57078 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIPK4P57078 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIPK4P57078 SLC7A15P-201ENST00000424028 1363 ntBASIC20.74■□□□□ 0.91
RIPK4P57078 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIPK4P57078 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RIPK4P57078 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RIPK4P57078 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RIPK4P57078 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIPK4P57078 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
RIPK4P57078 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RIPK4P57078 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC20.74■□□□□ 0.91
RIPK4P57078 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RIPK4P57078 TOMM22P5-201ENST00000416399 439 ntBASIC20.74■□□□□ 0.91
RIPK4P57078 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC20.74■□□□□ 0.91
RIPK4P57078 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RIPK4P57078 AL353779.1-201ENST00000434793 351 ntBASIC20.74■□□□□ 0.91
RIPK4P57078 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20.74■□□□□ 0.91
RIPK4P57078 COX20P2-201ENST00000452636 358 ntBASIC20.74■□□□□ 0.91
RIPK4P57078 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC20.74■□□□□ 0.91
RIPK4P57078 AC093004.1-201ENST00000508850 424 ntBASIC20.74■□□□□ 0.91
RIPK4P57078 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
RIPK4P57078 SLED1-202ENST00000512051 380 ntBASIC20.74■□□□□ 0.91
RIPK4P57078 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RIPK4P57078 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
RIPK4P57078 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIPK4P57078 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.74■□□□□ 0.91
RIPK4P57078 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIPK4P57078 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIPK4P57078 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIPK4P57078 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC20.74■□□□□ 0.91
RIPK4P57078 AMT-233ENST00000636522 1620 ntTSL 2 BASIC20.74■□□□□ 0.91
RIPK4P57078 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RIPK4P57078 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC20.74■□□□□ 0.91
RIPK4P57078 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms