Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3AP56704 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
WNT3AP56704 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3AP56704 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.08■□□□□ 0.16
WNT3AP56704 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3AP56704 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3AP56704 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.08■□□□□ 0.16
WNT3AP56704 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3AP56704 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
WNT3AP56704 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3AP56704 HYMAI-201ENST00000635591 3347 ntBASIC16.07■□□□□ 0.16
WNT3AP56704 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3AP56704 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
WNT3AP56704 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3AP56704 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.07■□□□□ 0.16
WNT3AP56704 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.07■□□□□ 0.16
WNT3AP56704 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.07■□□□□ 0.16
WNT3AP56704 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3AP56704 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
WNT3AP56704 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
WNT3AP56704 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.07■□□□□ 0.16
WNT3AP56704 RPL37AP1-201ENST00000412502 279 ntBASIC16.07■□□□□ 0.16
WNT3AP56704 METTL21AP1-201ENST00000438852 635 ntBASIC16.07■□□□□ 0.16
WNT3AP56704 AC125807.1-201ENST00000483097 614 ntBASIC16.07■□□□□ 0.16
WNT3AP56704 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.07■□□□□ 0.16
WNT3AP56704 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.07■□□□□ 0.16
WNT3AP56704 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.07■□□□□ 0.16
WNT3AP56704 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.07■□□□□ 0.16
WNT3AP56704 AC015911.4-201ENST00000588022 1070 ntBASIC16.07■□□□□ 0.16
WNT3AP56704 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
WNT3AP56704 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
WNT3AP56704 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3AP56704 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
WNT3AP56704 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3AP56704 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3AP56704 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3AP56704 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.07■□□□□ 0.16
WNT3AP56704 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.07■□□□□ 0.16
WNT3AP56704 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.07■□□□□ 0.16
WNT3AP56704 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3AP56704 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3AP56704 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3AP56704 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.07■□□□□ 0.16
WNT3AP56704 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3AP56704 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3AP56704 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.07■□□□□ 0.16
WNT3AP56704 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3AP56704 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.07■□□□□ 0.16
WNT3AP56704 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
WNT3AP56704 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3AP56704 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
WNT3AP56704 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3AP56704 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3AP56704 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3AP56704 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3AP56704 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3AP56704 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3AP56704 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.07■□□□□ 0.16
WNT3AP56704 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.07■□□□□ 0.16
WNT3AP56704 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
WNT3AP56704 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3AP56704 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3AP56704 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3AP56704 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3AP56704 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3AP56704 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.06■□□□□ 0.16
WNT3AP56704 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
WNT3AP56704 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3AP56704 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.06■□□□□ 0.16
WNT3AP56704 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.06■□□□□ 0.16
WNT3AP56704 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
WNT3AP56704 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3AP56704 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.06■□□□□ 0.16
WNT3AP56704 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3AP56704 AC020658.6-201ENST00000623564 1870 ntBASIC16.06■□□□□ 0.16
WNT3AP56704 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3AP56704 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3AP56704 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
WNT3AP56704 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3AP56704 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3AP56704 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3AP56704 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3AP56704 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
WNT3AP56704 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.06■□□□□ 0.16
WNT3AP56704 AC136604.1-201ENST00000418535 575 ntBASIC16.06■□□□□ 0.16
WNT3AP56704 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.06■□□□□ 0.16
WNT3AP56704 KLF2P3-201ENST00000451977 1087 ntBASIC16.06■□□□□ 0.16
WNT3AP56704 HLA-V-204ENST00000476601 1289 ntBASIC16.06■□□□□ 0.16
WNT3AP56704 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.06■□□□□ 0.16
WNT3AP56704 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.06■□□□□ 0.16
WNT3AP56704 AC051619.7-201ENST00000568314 623 ntBASIC16.06■□□□□ 0.16
WNT3AP56704 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.06■□□□□ 0.16
WNT3AP56704 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.06■□□□□ 0.16
WNT3AP56704 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.06■□□□□ 0.16
WNT3AP56704 SPDYE12P-201ENST00000618416 771 ntBASIC16.06■□□□□ 0.16
WNT3AP56704 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
WNT3AP56704 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3AP56704 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3AP56704 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3AP56704 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms