Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC11.86□□□□□ -0.51
CMC4P56277 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CMC4P56277 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CMC4P56277 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CMC4P56277 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC11.86□□□□□ -0.51
CMC4P56277 KCP-203ENST00000610776 5108 ntTSL 5 BASIC11.86□□□□□ -0.51
CMC4P56277 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CMC4P56277 WAC-202ENST00000347934 2839 ntTSL 5 BASIC11.86□□□□□ -0.51
CMC4P56277 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
CMC4P56277 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CMC4P56277 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC11.86□□□□□ -0.51
CMC4P56277 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC11.86□□□□□ -0.51
CMC4P56277 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC11.86□□□□□ -0.51
CMC4P56277 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CMC4P56277 CDC14C-201ENST00000428251 1719 ntBASIC11.86□□□□□ -0.51
CMC4P56277 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CMC4P56277 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
CMC4P56277 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CMC4P56277 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CMC4P56277 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC11.85□□□□□ -0.51
CMC4P56277 AL161772.1-201ENST00000610494 4412 ntBASIC11.85□□□□□ -0.51
CMC4P56277 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CMC4P56277 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC11.85□□□□□ -0.51
CMC4P56277 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC11.85□□□□□ -0.51
CMC4P56277 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
CMC4P56277 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
CMC4P56277 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CMC4P56277 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CMC4P56277 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
CMC4P56277 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CMC4P56277 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
CMC4P56277 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC11.85□□□□□ -0.51
CMC4P56277 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC11.85□□□□□ -0.51
CMC4P56277 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC11.85□□□□□ -0.51
CMC4P56277 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CMC4P56277 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC11.85□□□□□ -0.51
CMC4P56277 AC092580.3-201ENST00000430932 139 ntBASIC11.85□□□□□ -0.51
CMC4P56277 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CMC4P56277 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC11.85□□□□□ -0.51
CMC4P56277 LINC02447-202ENST00000501888 2146 ntBASIC11.85□□□□□ -0.51
CMC4P56277 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC11.85□□□□□ -0.51
CMC4P56277 EHF-205ENST00000527935 557 ntTSL 2 BASIC11.85□□□□□ -0.51
CMC4P56277 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 AC009118.2-201ENST00000613275 655 ntBASIC11.85□□□□□ -0.51
CMC4P56277 5S_rRNA.22-201ENST00000614916 106 ntBASIC11.85□□□□□ -0.51
CMC4P56277 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC11.85□□□□□ -0.51
CMC4P56277 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC11.85□□□□□ -0.51
CMC4P56277 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC11.85□□□□□ -0.51
CMC4P56277 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CMC4P56277 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC11.85□□□□□ -0.51
CMC4P56277 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC11.84□□□□□ -0.51
CMC4P56277 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC11.84□□□□□ -0.51
CMC4P56277 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CMC4P56277 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC11.84□□□□□ -0.51
CMC4P56277 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 AC022144.1-201ENST00000602255 1580 ntBASIC11.84□□□□□ -0.51
CMC4P56277 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC11.84□□□□□ -0.51
CMC4P56277 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 AC084018.2-201ENST00000613093 2607 ntBASIC11.84□□□□□ -0.51
CMC4P56277 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CMC4P56277 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC11.84□□□□□ -0.51
CMC4P56277 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms