Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CDH11P55287 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH11P55287 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH11P55287 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH11P55287 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH11P55287 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CDH11P55287 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH11P55287 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.66□□□□□ -0.06
CDH11P55287 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH11P55287 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDH11P55287 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH11P55287 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH11P55287 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH11P55287 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH11P55287 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH11P55287 AL136379.1-201ENST00000623471 2642 ntBASIC14.66□□□□□ -0.06
CDH11P55287 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH11P55287 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
CDH11P55287 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH11P55287 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH11P55287 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH11P55287 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH11P55287 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH11P55287 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDH11P55287 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH11P55287 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDH11P55287 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH11P55287 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.66□□□□□ -0.06
CDH11P55287 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH11P55287 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH11P55287 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH11P55287 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CDH11P55287 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.66□□□□□ -0.06
CDH11P55287 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH11P55287 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.66□□□□□ -0.06
CDH11P55287 METTL21AP1-201ENST00000438852 635 ntBASIC14.66□□□□□ -0.06
CDH11P55287 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.66□□□□□ -0.06
CDH11P55287 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDH11P55287 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH11P55287 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CDH11P55287 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDH11P55287 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH11P55287 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH11P55287 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH11P55287 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDH11P55287 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.66□□□□□ -0.06
CDH11P55287 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CDH11P55287 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH11P55287 LINC02228-204ENST00000642115 2962 ntBASIC14.66□□□□□ -0.06
CDH11P55287 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH11P55287 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH11P55287 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CDH11P55287 AC012569.1-201ENST00000591191 1524 ntBASIC14.66□□□□□ -0.06
CDH11P55287 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH11P55287 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH11P55287 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH11P55287 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDH11P55287 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH11P55287 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH11P55287 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH11P55287 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH11P55287 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH11P55287 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.65□□□□□ -0.06
CDH11P55287 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH11P55287 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CDH11P55287 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CDH11P55287 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH11P55287 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH11P55287 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH11P55287 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH11P55287 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH11P55287 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH11P55287 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH11P55287 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH11P55287 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH11P55287 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.65□□□□□ -0.06
CDH11P55287 AL031432.2-201ENST00000566714 459 ntBASIC14.65□□□□□ -0.06
CDH11P55287 AL928711.1-201ENST00000570165 459 ntBASIC14.65□□□□□ -0.06
CDH11P55287 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH11P55287 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH11P55287 AC006486.2-201ENST00000624246 2199 ntBASIC14.65□□□□□ -0.06
CDH11P55287 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH11P55287 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDH11P55287 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.65□□□□□ -0.06
CDH11P55287 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDH11P55287 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH11P55287 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH11P55287 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms