Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH4P55283 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH4P55283 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH4P55283 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
CDH4P55283 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH4P55283 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH4P55283 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CDH4P55283 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH4P55283 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH4P55283 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH4P55283 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH4P55283 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH4P55283 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH4P55283 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH4P55283 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CDH4P55283 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH4P55283 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH4P55283 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH4P55283 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CDH4P55283 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH4P55283 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CDH4P55283 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH4P55283 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH4P55283 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH4P55283 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH4P55283 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH4P55283 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH4P55283 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH4P55283 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH4P55283 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH4P55283 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CDH4P55283 TOMM22P5-201ENST00000416399 439 ntBASIC16.22■□□□□ 0.19
CDH4P55283 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH4P55283 DFFBP1-201ENST00000433250 979 ntBASIC16.22■□□□□ 0.19
CDH4P55283 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH4P55283 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.22■□□□□ 0.19
CDH4P55283 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.22■□□□□ 0.19
CDH4P55283 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.22■□□□□ 0.19
CDH4P55283 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH4P55283 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
CDH4P55283 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH4P55283 AL132655.2-201ENST00000596276 594 ntBASIC16.22■□□□□ 0.19
CDH4P55283 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH4P55283 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH4P55283 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.22■□□□□ 0.19
CDH4P55283 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CDH4P55283 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH4P55283 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
CDH4P55283 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH4P55283 AC007541.1-201ENST00000570282 1469 ntBASIC16.22■□□□□ 0.19
CDH4P55283 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
CDH4P55283 AL365203.3-201ENST00000609742 2057 ntBASIC16.22■□□□□ 0.19
CDH4P55283 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CDH4P55283 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
CDH4P55283 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH4P55283 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH4P55283 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CDH4P55283 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH4P55283 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH4P55283 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH4P55283 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH4P55283 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH4P55283 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH4P55283 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH4P55283 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH4P55283 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
CDH4P55283 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
CDH4P55283 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CDH4P55283 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH4P55283 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.21■□□□□ 0.19
CDH4P55283 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH4P55283 AL353779.1-201ENST00000434793 351 ntBASIC16.21■□□□□ 0.19
CDH4P55283 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.21■□□□□ 0.19
CDH4P55283 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH4P55283 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH4P55283 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH4P55283 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH4P55283 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.21■□□□□ 0.19
CDH4P55283 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH4P55283 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH4P55283 LINC02084-201ENST00000606069 1096 ntBASIC16.21■□□□□ 0.19
CDH4P55283 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH4P55283 PKD1P5-201ENST00000532415 10291 ntBASIC16.21■□□□□ 0.19
CDH4P55283 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH4P55283 AL391825.1-201ENST00000457671 1364 ntBASIC16.21■□□□□ 0.19
CDH4P55283 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH4P55283 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH4P55283 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH4P55283 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH4P55283 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.21■□□□□ 0.18
CDH4P55283 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDH4P55283 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDH4P55283 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.18
CDH4P55283 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.2■□□□□ 0.18
CDH4P55283 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDH4P55283 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CDH4P55283 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH4P55283 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH4P55283 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH4P55283 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms