Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PDX1P52945 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PDX1P52945 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDX1P52945 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
PDX1P52945 AL391005.1-201ENST00000623953 2435 ntBASIC15.46■□□□□ 0.07
PDX1P52945 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PDX1P52945 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PDX1P52945 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDX1P52945 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PDX1P52945 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.46■□□□□ 0.07
PDX1P52945 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDX1P52945 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDX1P52945 MIR658-201ENST00000385210 100 ntBASIC15.46■□□□□ 0.07
PDX1P52945 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.46■□□□□ 0.07
PDX1P52945 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.46■□□□□ 0.07
PDX1P52945 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PDX1P52945 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.46■□□□□ 0.07
PDX1P52945 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.46■□□□□ 0.07
PDX1P52945 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.46■□□□□ 0.07
PDX1P52945 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PDX1P52945 AC074044.1-201ENST00000609673 707 ntBASIC15.46■□□□□ 0.07
PDX1P52945 WFDC1-204ENST00000613603 549 ntBASIC15.46■□□□□ 0.07
PDX1P52945 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDX1P52945 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDX1P52945 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PDX1P52945 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.46■□□□□ 0.07
PDX1P52945 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDX1P52945 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDX1P52945 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.46■□□□□ 0.07
PDX1P52945 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.46■□□□□ 0.07
PDX1P52945 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.46■□□□□ 0.07
PDX1P52945 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PDX1P52945 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDX1P52945 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDX1P52945 AC026691.1-201ENST00000602502 2017 ntBASIC15.46■□□□□ 0.07
PDX1P52945 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
PDX1P52945 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PDX1P52945 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDX1P52945 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDX1P52945 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.45■□□□□ 0.06
PDX1P52945 CYP4F24P-201ENST00000586049 1580 ntBASIC15.45■□□□□ 0.06
PDX1P52945 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDX1P52945 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDX1P52945 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDX1P52945 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDX1P52945 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.45■□□□□ 0.06
PDX1P52945 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDX1P52945 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.45■□□□□ 0.06
PDX1P52945 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDX1P52945 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDX1P52945 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDX1P52945 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDX1P52945 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDX1P52945 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.45■□□□□ 0.06
PDX1P52945 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.45■□□□□ 0.06
PDX1P52945 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.45■□□□□ 0.06
PDX1P52945 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDX1P52945 AC022494.1-201ENST00000466044 728 ntBASIC15.45■□□□□ 0.06
PDX1P52945 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.45■□□□□ 0.06
PDX1P52945 AC119751.2-201ENST00000504529 210 ntBASIC15.45■□□□□ 0.06
PDX1P52945 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.45■□□□□ 0.06
PDX1P52945 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.45■□□□□ 0.06
PDX1P52945 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.45■□□□□ 0.06
PDX1P52945 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.45■□□□□ 0.06
PDX1P52945 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.45■□□□□ 0.06
PDX1P52945 PCGF3-213ENST00000620529 1899 ntBASIC15.45■□□□□ 0.06
PDX1P52945 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PDX1P52945 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.45■□□□□ 0.06
PDX1P52945 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDX1P52945 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDX1P52945 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PDX1P52945 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDX1P52945 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDX1P52945 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
PDX1P52945 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDX1P52945 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.45■□□□□ 0.06
PDX1P52945 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDX1P52945 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.45■□□□□ 0.06
PDX1P52945 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.45■□□□□ 0.06
PDX1P52945 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PDX1P52945 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
PDX1P52945 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
PDX1P52945 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.44■□□□□ 0.06
PDX1P52945 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.44■□□□□ 0.06
PDX1P52945 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PDX1P52945 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDX1P52945 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.44■□□□□ 0.06
PDX1P52945 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PDX1P52945 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDX1P52945 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDX1P52945 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
PDX1P52945 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.44■□□□□ 0.06
PDX1P52945 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDX1P52945 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDX1P52945 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.44■□□□□ 0.06
PDX1P52945 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.44■□□□□ 0.06
PDX1P52945 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.44■□□□□ 0.06
PDX1P52945 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.44■□□□□ 0.06
PDX1P52945 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.44■□□□□ 0.06
PDX1P52945 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms