Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HMGA2P52926 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.53□□□□□ -0.08
HMGA2P52926 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HMGA2P52926 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HMGA2P52926 KRT8P37-201ENST00000451609 1420 ntBASIC14.53□□□□□ -0.08
HMGA2P52926 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGA2P52926 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.53□□□□□ -0.08
HMGA2P52926 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGA2P52926 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.53□□□□□ -0.08
HMGA2P52926 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGA2P52926 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.53□□□□□ -0.08
HMGA2P52926 AC093909.1-201ENST00000504731 1122 ntBASIC14.53□□□□□ -0.08
HMGA2P52926 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HMGA2P52926 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HMGA2P52926 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.53□□□□□ -0.08
HMGA2P52926 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.53□□□□□ -0.08
HMGA2P52926 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.53□□□□□ -0.08
HMGA2P52926 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.53□□□□□ -0.08
HMGA2P52926 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.53□□□□□ -0.08
HMGA2P52926 AC097359.3-201ENST00000603982 1210 ntBASIC14.53□□□□□ -0.08
HMGA2P52926 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGA2P52926 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HMGA2P52926 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGA2P52926 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.53□□□□□ -0.08
HMGA2P52926 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HMGA2P52926 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGA2P52926 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGA2P52926 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.53□□□□□ -0.08
HMGA2P52926 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HMGA2P52926 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGA2P52926 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGA2P52926 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.52□□□□□ -0.08
HMGA2P52926 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGA2P52926 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGA2P52926 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGA2P52926 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGA2P52926 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
HMGA2P52926 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.52□□□□□ -0.08
HMGA2P52926 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.52□□□□□ -0.08
HMGA2P52926 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.52□□□□□ -0.08
HMGA2P52926 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGA2P52926 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.52□□□□□ -0.08
HMGA2P52926 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HMGA2P52926 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGA2P52926 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.52□□□□□ -0.08
HMGA2P52926 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
HMGA2P52926 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGA2P52926 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
HMGA2P52926 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.52□□□□□ -0.08
HMGA2P52926 AKAP8P1-201ENST00000434743 1349 ntBASIC14.52□□□□□ -0.08
HMGA2P52926 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.52□□□□□ -0.08
HMGA2P52926 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGA2P52926 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGA2P52926 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.52□□□□□ -0.09
HMGA2P52926 FAM220BP-201ENST00000377689 816 ntBASIC14.52□□□□□ -0.09
HMGA2P52926 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGA2P52926 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
HMGA2P52926 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HMGA2P52926 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HMGA2P52926 AC074386.1-202ENST00000463561 864 ntBASIC14.52□□□□□ -0.09
HMGA2P52926 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HMGA2P52926 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.52□□□□□ -0.09
HMGA2P52926 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.52□□□□□ -0.09
HMGA2P52926 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.52□□□□□ -0.09
HMGA2P52926 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.52□□□□□ -0.09
HMGA2P52926 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.52□□□□□ -0.09
HMGA2P52926 Z83851.2-201ENST00000609564 659 ntBASIC14.52□□□□□ -0.09
HMGA2P52926 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGA2P52926 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGA2P52926 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.52□□□□□ -0.09
HMGA2P52926 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
HMGA2P52926 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.52□□□□□ -0.09
HMGA2P52926 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGA2P52926 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.52□□□□□ -0.09
HMGA2P52926 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGA2P52926 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.52□□□□□ -0.09
HMGA2P52926 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HMGA2P52926 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
HMGA2P52926 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
HMGA2P52926 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGA2P52926 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
HMGA2P52926 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGA2P52926 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HMGA2P52926 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.51□□□□□ -0.09
HMGA2P52926 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HMGA2P52926 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HMGA2P52926 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HMGA2P52926 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.51□□□□□ -0.09
HMGA2P52926 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
HMGA2P52926 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGA2P52926 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HMGA2P52926 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.51□□□□□ -0.09
HMGA2P52926 AJ011931.1-201ENST00000618749 2492 ntBASIC14.51□□□□□ -0.09
HMGA2P52926 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.51□□□□□ -0.09
HMGA2P52926 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGA2P52926 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGA2P52926 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGA2P52926 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGA2P52926 FAAHP1-202ENST00000446499 1238 ntBASIC14.51□□□□□ -0.09
HMGA2P52926 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms