Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCN2P51788 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CLCN2P51788 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCN2P51788 WASH6P-202ENST00000359512 1437 ntBASIC15.5■□□□□ 0.07
CLCN2P51788 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CLCN2P51788 AL137784.3-201ENST00000623858 2288 ntBASIC15.5■□□□□ 0.07
CLCN2P51788 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.5■□□□□ 0.07
CLCN2P51788 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCN2P51788 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN2P51788 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
CLCN2P51788 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN2P51788 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN2P51788 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN2P51788 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.49■□□□□ 0.07
CLCN2P51788 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN2P51788 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.49■□□□□ 0.07
CLCN2P51788 PID1-202ENST00000392054 2745 ntTSL 2 BASIC15.49■□□□□ 0.07
CLCN2P51788 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
CLCN2P51788 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CLCN2P51788 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CLCN2P51788 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN2P51788 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN2P51788 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN2P51788 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CLCN2P51788 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN2P51788 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.49■□□□□ 0.07
CLCN2P51788 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN2P51788 ADH5P3-201ENST00000433842 1137 ntBASIC15.49■□□□□ 0.07
CLCN2P51788 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.49■□□□□ 0.07
CLCN2P51788 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.49■□□□□ 0.07
CLCN2P51788 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CLCN2P51788 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.49■□□□□ 0.07
CLCN2P51788 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
CLCN2P51788 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.49■□□□□ 0.07
CLCN2P51788 AC004835.2-201ENST00000603762 682 ntBASIC15.49■□□□□ 0.07
CLCN2P51788 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.49■□□□□ 0.07
CLCN2P51788 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.49■□□□□ 0.07
CLCN2P51788 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN2P51788 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN2P51788 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CLCN2P51788 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN2P51788 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.49■□□□□ 0.07
CLCN2P51788 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN2P51788 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.49■□□□□ 0.07
CLCN2P51788 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN2P51788 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.49■□□□□ 0.07
CLCN2P51788 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.49■□□□□ 0.07
CLCN2P51788 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN2P51788 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CLCN2P51788 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.49■□□□□ 0.07
CLCN2P51788 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN2P51788 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLCN2P51788 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.49■□□□□ 0.07
CLCN2P51788 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.48■□□□□ 0.07
CLCN2P51788 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN2P51788 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CLCN2P51788 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CLCN2P51788 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.48■□□□□ 0.07
CLCN2P51788 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.48■□□□□ 0.07
CLCN2P51788 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CLCN2P51788 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
CLCN2P51788 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.48■□□□□ 0.07
CLCN2P51788 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN2P51788 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.48■□□□□ 0.07
CLCN2P51788 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN2P51788 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN2P51788 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN2P51788 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN2P51788 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.48■□□□□ 0.07
CLCN2P51788 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN2P51788 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.48■□□□□ 0.07
CLCN2P51788 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN2P51788 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.48■□□□□ 0.07
CLCN2P51788 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN2P51788 MIR648-201ENST00000385046 94 ntBASIC15.48■□□□□ 0.07
CLCN2P51788 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN2P51788 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.48■□□□□ 0.07
CLCN2P51788 AC092183.1-201ENST00000469884 875 ntBASIC15.48■□□□□ 0.07
CLCN2P51788 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.48■□□□□ 0.07
CLCN2P51788 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CLCN2P51788 AL135744.1-201ENST00000565098 629 ntBASIC15.48■□□□□ 0.07
CLCN2P51788 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.48■□□□□ 0.07
CLCN2P51788 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.48■□□□□ 0.07
CLCN2P51788 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN2P51788 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN2P51788 AL513210.1-201ENST00000629608 234 ntBASIC15.48■□□□□ 0.07
CLCN2P51788 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.48■□□□□ 0.07
CLCN2P51788 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN2P51788 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CLCN2P51788 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN2P51788 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN2P51788 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN2P51788 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN2P51788 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN2P51788 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.48■□□□□ 0.07
CLCN2P51788 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.48■□□□□ 0.07
CLCN2P51788 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN2P51788 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.47■□□□□ 0.07
CLCN2P51788 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN2P51788 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms