Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBP50607 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBP50607 AC092384.3-202ENST00000564646 2873 ntBASIC16.8■□□□□ 0.28
TUBP50607 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.8■□□□□ 0.28
TUBP50607 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBP50607 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TUBP50607 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.8■□□□□ 0.28
TUBP50607 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TUBP50607 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TUBP50607 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBP50607 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.8■□□□□ 0.28
TUBP50607 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBP50607 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TUBP50607 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBP50607 AC004987.2-201ENST00000395959 1148 ntBASIC16.8■□□□□ 0.28
TUBP50607 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.8■□□□□ 0.28
TUBP50607 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
TUBP50607 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.8■□□□□ 0.28
TUBP50607 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.8■□□□□ 0.28
TUBP50607 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TUBP50607 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.8■□□□□ 0.28
TUBP50607 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBP50607 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.8■□□□□ 0.28
TUBP50607 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TUBP50607 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBP50607 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TUBP50607 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBP50607 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBP50607 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TUBP50607 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.8■□□□□ 0.28
TUBP50607 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TUBP50607 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TUBP50607 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
TUBP50607 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.8■□□□□ 0.28
TUBP50607 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.79■□□□□ 0.28
TUBP50607 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.79■□□□□ 0.28
TUBP50607 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBP50607 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBP50607 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TUBP50607 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TUBP50607 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBP50607 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBP50607 TCAF2P1-201ENST00000291129 2421 ntBASIC16.79■□□□□ 0.28
TUBP50607 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TUBP50607 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBP50607 AL136982.4-201ENST00000437689 1740 ntBASIC16.79■□□□□ 0.28
TUBP50607 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.79■□□□□ 0.28
TUBP50607 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TUBP50607 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TUBP50607 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TUBP50607 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TUBP50607 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.79■□□□□ 0.28
TUBP50607 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBP50607 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TUBP50607 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBP50607 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TUBP50607 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TUBP50607 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBP50607 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBP50607 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBP50607 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.79■□□□□ 0.28
TUBP50607 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBP50607 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.79■□□□□ 0.28
TUBP50607 EEF1DP4-201ENST00000446006 880 ntBASIC16.79■□□□□ 0.28
TUBP50607 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.79■□□□□ 0.28
TUBP50607 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.79■□□□□ 0.28
TUBP50607 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.79■□□□□ 0.28
TUBP50607 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.79■□□□□ 0.28
TUBP50607 AC243562.2-201ENST00000561247 970 ntBASIC16.79■□□□□ 0.28
TUBP50607 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
TUBP50607 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.79■□□□□ 0.28
TUBP50607 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.79■□□□□ 0.28
TUBP50607 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.79■□□□□ 0.28
TUBP50607 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBP50607 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBP50607 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TUBP50607 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TUBP50607 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.79■□□□□ 0.28
TUBP50607 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBP50607 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBP50607 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TUBP50607 AL691432.1-201ENST00000596308 1422 ntBASIC16.79■□□□□ 0.28
TUBP50607 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TUBP50607 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.78■□□□□ 0.28
TUBP50607 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.78■□□□□ 0.28
TUBP50607 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TUBP50607 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.78■□□□□ 0.28
TUBP50607 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.78■□□□□ 0.28
TUBP50607 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.78■□□□□ 0.28
TUBP50607 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.78■□□□□ 0.28
TUBP50607 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.78■□□□□ 0.28
TUBP50607 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBP50607 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms