Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLK1P49759 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLK1P49759 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CLK1P49759 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLK1P49759 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLK1P49759 HMGA1P7-201ENST00000406908 502 ntBASIC15.07■□□□□ 0
CLK1P49759 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.07■□□□□ 0
CLK1P49759 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CLK1P49759 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.07■□□□□ 0
CLK1P49759 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
CLK1P49759 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.07■□□□□ 0
CLK1P49759 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CLK1P49759 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CLK1P49759 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.07■□□□□ 0
CLK1P49759 AC021097.1-201ENST00000607902 574 ntBASIC15.07■□□□□ 0
CLK1P49759 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLK1P49759 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.07■□□□□ 0
CLK1P49759 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CLK1P49759 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.07■□□□□ 0
CLK1P49759 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLK1P49759 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLK1P49759 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.07■□□□□ 0
CLK1P49759 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
CLK1P49759 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLK1P49759 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLK1P49759 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.07■□□□□ 0
CLK1P49759 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CLK1P49759 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CLK1P49759 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.07■□□□□ 0
CLK1P49759 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.07■□□□□ 0
CLK1P49759 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CLK1P49759 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CLK1P49759 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CLK1P49759 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLK1P49759 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLK1P49759 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLK1P49759 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLK1P49759 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLK1P49759 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.06■□□□□ 0
CLK1P49759 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLK1P49759 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLK1P49759 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.06■□□□□ 0
CLK1P49759 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
CLK1P49759 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.06■□□□□ 0
CLK1P49759 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CLK1P49759 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.06■□□□□ 0
CLK1P49759 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.06■□□□□ 0
CLK1P49759 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.06■□□□□ 0
CLK1P49759 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLK1P49759 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.06■□□□□ 0
CLK1P49759 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.06■□□□□ 0
CLK1P49759 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.06■□□□□ 0
CLK1P49759 KRT18P58-201ENST00000527480 1120 ntBASIC15.06■□□□□ 0
CLK1P49759 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.06■□□□□ 0
CLK1P49759 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.06■□□□□ 0
CLK1P49759 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.06■□□□□ 0
CLK1P49759 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.06■□□□□ 0
CLK1P49759 AC140113.2-201ENST00000604370 208 ntBASIC15.06■□□□□ 0
CLK1P49759 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.06■□□□□ 0
CLK1P49759 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.06■□□□□ 0
CLK1P49759 AC004877.2-201ENST00000623941 599 ntBASIC15.06■□□□□ 0
CLK1P49759 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLK1P49759 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLK1P49759 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.06■□□□□ 0
CLK1P49759 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.06■□□□□ 0
CLK1P49759 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLK1P49759 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLK1P49759 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.06■□□□□ 0
CLK1P49759 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CLK1P49759 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLK1P49759 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.06■□□□□ 0
CLK1P49759 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLK1P49759 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.05■□□□□ 0
CLK1P49759 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.05■□□□□ 0
CLK1P49759 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CLK1P49759 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
CLK1P49759 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CLK1P49759 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.05■□□□□ 0
CLK1P49759 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.05■□□□□ 0
CLK1P49759 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.05■□□□□ 0
CLK1P49759 AC138035.3-201ENST00000622706 2791 ntBASIC15.05■□□□□ 0
CLK1P49759 RNU1-129P-201ENST00000384064 167 ntBASIC15.05■□□□□ -0
CLK1P49759 AL022342.1-201ENST00000400363 863 ntBASIC15.05■□□□□ -0
CLK1P49759 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CLK1P49759 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.05■□□□□ -0
CLK1P49759 AC007967.2-201ENST00000432613 625 ntBASIC15.05■□□□□ -0
CLK1P49759 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.05■□□□□ -0
CLK1P49759 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.05■□□□□ -0
CLK1P49759 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CLK1P49759 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.05■□□□□ -0
CLK1P49759 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.05■□□□□ -0
CLK1P49759 U1.21-201ENST00000580816 167 ntBASIC15.05■□□□□ -0
CLK1P49759 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ -0
CLK1P49759 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.05■□□□□ -0
CLK1P49759 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.05■□□□□ -0
CLK1P49759 BCAR1-209ENST00000546196 1340 ntBASIC15.05■□□□□ -0
CLK1P49759 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.05■□□□□ -0
CLK1P49759 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CLK1P49759 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.05■□□□□ -0
CLK1P49759 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms