Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.82■□□□□ 0.6
TNNI2P48788 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TNNI2P48788 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNNI2P48788 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNNI2P48788 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.82■□□□□ 0.6
TNNI2P48788 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.82■□□□□ 0.6
TNNI2P48788 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.82■□□□□ 0.6
TNNI2P48788 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.82■□□□□ 0.6
TNNI2P48788 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNNI2P48788 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNNI2P48788 AL450472.2-201ENST00000603663 1156 ntBASIC18.82■□□□□ 0.6
TNNI2P48788 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.82■□□□□ 0.6
TNNI2P48788 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.82■□□□□ 0.6
TNNI2P48788 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNNI2P48788 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.82■□□□□ 0.6
TNNI2P48788 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.82■□□□□ 0.6
TNNI2P48788 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TNNI2P48788 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNNI2P48788 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNNI2P48788 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.82■□□□□ 0.6
TNNI2P48788 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.82■□□□□ 0.6
TNNI2P48788 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.82■□□□□ 0.6
TNNI2P48788 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TNNI2P48788 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TNNI2P48788 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.82■□□□□ 0.6
TNNI2P48788 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNNI2P48788 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.82■□□□□ 0.6
TNNI2P48788 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.82■□□□□ 0.6
TNNI2P48788 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNNI2P48788 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNNI2P48788 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNNI2P48788 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TNNI2P48788 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNNI2P48788 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.82■□□□□ 0.6
TNNI2P48788 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNNI2P48788 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNNI2P48788 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.82■□□□□ 0.6
TNNI2P48788 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNNI2P48788 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.82■□□□□ 0.6
TNNI2P48788 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.81■□□□□ 0.6
TNNI2P48788 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.81■□□□□ 0.6
TNNI2P48788 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNNI2P48788 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.81■□□□□ 0.6
TNNI2P48788 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TNNI2P48788 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
TNNI2P48788 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNNI2P48788 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNNI2P48788 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TNNI2P48788 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.81■□□□□ 0.6
TNNI2P48788 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNNI2P48788 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TNNI2P48788 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.81■□□□□ 0.6
TNNI2P48788 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
TNNI2P48788 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TNNI2P48788 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.81■□□□□ 0.6
TNNI2P48788 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNNI2P48788 MIR1908-201ENST00000410394 80 ntBASIC18.81■□□□□ 0.6
TNNI2P48788 BAATP1-201ENST00000412284 1225 ntBASIC18.81■□□□□ 0.6
TNNI2P48788 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.81■□□□□ 0.6
TNNI2P48788 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TNNI2P48788 AC007551.1-201ENST00000457394 519 ntBASIC18.81■□□□□ 0.6
TNNI2P48788 VDAC1P7-201ENST00000462417 847 ntBASIC18.81■□□□□ 0.6
TNNI2P48788 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.81■□□□□ 0.6
TNNI2P48788 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TNNI2P48788 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.81■□□□□ 0.6
TNNI2P48788 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.81■□□□□ 0.6
TNNI2P48788 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.81■□□□□ 0.6
TNNI2P48788 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNNI2P48788 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNNI2P48788 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.81■□□□□ 0.6
TNNI2P48788 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNNI2P48788 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TNNI2P48788 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNNI2P48788 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TNNI2P48788 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.81■□□□□ 0.6
TNNI2P48788 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
TNNI2P48788 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.81■□□□□ 0.6
TNNI2P48788 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNNI2P48788 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNNI2P48788 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNNI2P48788 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.81■□□□□ 0.6
TNNI2P48788 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.81■□□□□ 0.6
TNNI2P48788 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNNI2P48788 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNNI2P48788 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNNI2P48788 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNNI2P48788 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TNNI2P48788 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNNI2P48788 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNNI2P48788 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.8■□□□□ 0.6
TNNI2P48788 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNNI2P48788 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TNNI2P48788 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TNNI2P48788 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNNI2P48788 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TNNI2P48788 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNNI2P48788 AC136604.1-201ENST00000418535 575 ntBASIC18.8■□□□□ 0.6
TNNI2P48788 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.8■□□□□ 0.6
TNNI2P48788 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.8■□□□□ 0.6
TNNI2P48788 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms