Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL12P48061 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL12P48061 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CXCL12P48061 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CXCL12P48061 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.68■□□□□ 0.1
CXCL12P48061 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.68■□□□□ 0.1
CXCL12P48061 AL590640.2-201ENST00000457038 527 ntBASIC15.68■□□□□ 0.1
CXCL12P48061 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.68■□□□□ 0.1
CXCL12P48061 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.68■□□□□ 0.1
CXCL12P48061 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.68■□□□□ 0.1
CXCL12P48061 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL12P48061 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.68■□□□□ 0.1
CXCL12P48061 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.68■□□□□ 0.1
CXCL12P48061 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.68■□□□□ 0.1
CXCL12P48061 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.68■□□□□ 0.1
CXCL12P48061 AL096828.3-201ENST00000615354 462 ntBASIC15.68■□□□□ 0.1
CXCL12P48061 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.68■□□□□ 0.1
CXCL12P48061 BX539320.1-201ENST00000623759 877 ntBASIC15.68■□□□□ 0.1
CXCL12P48061 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.68■□□□□ 0.1
CXCL12P48061 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL12P48061 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL12P48061 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL12P48061 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL12P48061 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL12P48061 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL12P48061 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CXCL12P48061 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.68■□□□□ 0.1
CXCL12P48061 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL12P48061 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL12P48061 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL12P48061 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.68■□□□□ 0.1
CXCL12P48061 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL12P48061 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL12P48061 AL138799.1-201ENST00000448213 1675 ntBASIC15.67■□□□□ 0.1
CXCL12P48061 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL12P48061 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CXCL12P48061 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CXCL12P48061 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL12P48061 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
CXCL12P48061 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL12P48061 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.67■□□□□ 0.1
CXCL12P48061 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL12P48061 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL12P48061 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL12P48061 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.67■□□□□ 0.1
CXCL12P48061 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL12P48061 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL12P48061 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL12P48061 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL12P48061 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL12P48061 EIF4HP1-201ENST00000453115 687 ntBASIC15.67■□□□□ 0.1
CXCL12P48061 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.67■□□□□ 0.1
CXCL12P48061 HIST2H2BC-201ENST00000498492 580 ntBASIC15.67■□□□□ 0.1
CXCL12P48061 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.67■□□□□ 0.1
CXCL12P48061 AC105129.2-201ENST00000559536 390 ntBASIC15.67■□□□□ 0.1
CXCL12P48061 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.67■□□□□ 0.1
CXCL12P48061 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.67■□□□□ 0.1
CXCL12P48061 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.67■□□□□ 0.1
CXCL12P48061 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CXCL12P48061 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.67■□□□□ 0.1
CXCL12P48061 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL12P48061 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.67■□□□□ 0.1
CXCL12P48061 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CXCL12P48061 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL12P48061 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CXCL12P48061 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CXCL12P48061 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL12P48061 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.66■□□□□ 0.1
CXCL12P48061 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL12P48061 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.66■□□□□ 0.1
CXCL12P48061 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL12P48061 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL12P48061 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL12P48061 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL12P48061 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL12P48061 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL12P48061 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL12P48061 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL12P48061 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL12P48061 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL12P48061 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.66■□□□□ 0.1
CXCL12P48061 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CXCL12P48061 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.66■□□□□ 0.1
CXCL12P48061 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.66■□□□□ 0.1
CXCL12P48061 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.66■□□□□ 0.1
CXCL12P48061 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.66■□□□□ 0.1
CXCL12P48061 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.66■□□□□ 0.1
CXCL12P48061 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CXCL12P48061 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.66■□□□□ 0.1
CXCL12P48061 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.66■□□□□ 0.1
CXCL12P48061 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL12P48061 MIR6727-201ENST00000620702 65 ntBASIC15.66■□□□□ 0.1
CXCL12P48061 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL12P48061 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
CXCL12P48061 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CXCL12P48061 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL12P48061 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CXCL12P48061 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.66■□□□□ 0.1
CXCL12P48061 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.65■□□□□ 0.1
CXCL12P48061 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms