Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP13P45452 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
MMP13P45452 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MMP13P45452 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
MMP13P45452 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.6■□□□□ 0.25
MMP13P45452 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
MMP13P45452 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.6■□□□□ 0.25
MMP13P45452 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
MMP13P45452 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP13P45452 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.6■□□□□ 0.25
MMP13P45452 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
MMP13P45452 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP13P45452 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MMP13P45452 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP13P45452 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.6■□□□□ 0.25
MMP13P45452 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
MMP13P45452 AL627223.1-201ENST00000416693 442 ntBASIC16.6■□□□□ 0.25
MMP13P45452 KRT18P32-201ENST00000424695 1287 ntBASIC16.6■□□□□ 0.25
MMP13P45452 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.6■□□□□ 0.25
MMP13P45452 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
MMP13P45452 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.6■□□□□ 0.25
MMP13P45452 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
MMP13P45452 SNHG9-202ENST00000564014 471 ntBASIC16.6■□□□□ 0.25
MMP13P45452 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
MMP13P45452 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP13P45452 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.6■□□□□ 0.25
MMP13P45452 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.6■□□□□ 0.25
MMP13P45452 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.6■□□□□ 0.25
MMP13P45452 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP13P45452 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.6■□□□□ 0.25
MMP13P45452 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
MMP13P45452 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP13P45452 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.6■□□□□ 0.25
MMP13P45452 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP13P45452 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP13P45452 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.6■□□□□ 0.25
MMP13P45452 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.6■□□□□ 0.25
MMP13P45452 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP13P45452 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.59■□□□□ 0.25
MMP13P45452 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
MMP13P45452 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MMP13P45452 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.59■□□□□ 0.25
MMP13P45452 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MMP13P45452 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MMP13P45452 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MMP13P45452 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
MMP13P45452 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.59■□□□□ 0.25
MMP13P45452 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.59■□□□□ 0.25
MMP13P45452 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
MMP13P45452 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MMP13P45452 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MMP13P45452 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
MMP13P45452 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MMP13P45452 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
MMP13P45452 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MMP13P45452 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.59■□□□□ 0.25
MMP13P45452 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MMP13P45452 CNN2P11-201ENST00000429351 262 ntBASIC16.59■□□□□ 0.25
MMP13P45452 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MMP13P45452 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MMP13P45452 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
MMP13P45452 AC093520.2-201ENST00000561830 333 ntBASIC16.59■□□□□ 0.25
MMP13P45452 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
MMP13P45452 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
MMP13P45452 AL596442.2-201ENST00000610240 980 ntBASIC16.59■□□□□ 0.25
MMP13P45452 AL691403.2-201ENST00000618460 490 ntBASIC16.59■□□□□ 0.25
MMP13P45452 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
MMP13P45452 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
MMP13P45452 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MMP13P45452 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.59■□□□□ 0.25
MMP13P45452 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.59■□□□□ 0.25
MMP13P45452 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.59■□□□□ 0.25
MMP13P45452 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.59■□□□□ 0.25
MMP13P45452 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MMP13P45452 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
MMP13P45452 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.59■□□□□ 0.25
MMP13P45452 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MMP13P45452 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
MMP13P45452 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MMP13P45452 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.59■□□□□ 0.25
MMP13P45452 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
MMP13P45452 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
MMP13P45452 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
MMP13P45452 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MMP13P45452 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.58■□□□□ 0.25
MMP13P45452 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
MMP13P45452 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MMP13P45452 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
MMP13P45452 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP13P45452 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP13P45452 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP13P45452 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
MMP13P45452 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP13P45452 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MMP13P45452 RPS8P6-201ENST00000426177 609 ntBASIC16.58■□□□□ 0.24
MMP13P45452 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.58■□□□□ 0.24
MMP13P45452 DNAJB3-202ENST00000449667 1266 ntBASIC16.58■□□□□ 0.24
MMP13P45452 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MMP13P45452 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.58■□□□□ 0.24
MMP13P45452 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms