Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.06□□□□□ -0.32
CEACAM3P40198 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CEACAM3P40198 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.05□□□□□ -0.32
CEACAM3P40198 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM3P40198 CETN4P-206ENST00000642099 2168 ntBASIC13.05□□□□□ -0.32
CEACAM3P40198 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CEACAM3P40198 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.05□□□□□ -0.32
CEACAM3P40198 AL691432.1-201ENST00000596308 1422 ntBASIC13.05□□□□□ -0.32
CEACAM3P40198 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
CEACAM3P40198 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.05□□□□□ -0.32
CEACAM3P40198 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM3P40198 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM3P40198 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM3P40198 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.05□□□□□ -0.32
CEACAM3P40198 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CEACAM3P40198 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM3P40198 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM3P40198 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM3P40198 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM3P40198 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.05□□□□□ -0.32
CEACAM3P40198 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM3P40198 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CEACAM3P40198 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM3P40198 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM3P40198 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM3P40198 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.05□□□□□ -0.32
CEACAM3P40198 AC107890.1-201ENST00000422478 521 ntBASIC13.05□□□□□ -0.32
CEACAM3P40198 AL645939.2-201ENST00000427340 991 ntBASIC13.05□□□□□ -0.32
CEACAM3P40198 SERBP1P3-201ENST00000459980 809 ntBASIC13.05□□□□□ -0.32
CEACAM3P40198 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.05□□□□□ -0.32
CEACAM3P40198 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.05□□□□□ -0.32
CEACAM3P40198 RN7SL828P-201ENST00000607615 303 ntBASIC13.05□□□□□ -0.32
CEACAM3P40198 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.05□□□□□ -0.32
CEACAM3P40198 AC008677.1-201ENST00000519230 1561 ntBASIC13.05□□□□□ -0.32
CEACAM3P40198 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM3P40198 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
CEACAM3P40198 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
CEACAM3P40198 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CEACAM3P40198 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM3P40198 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM3P40198 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM3P40198 DOC2GP-204ENST00000639052 2548 ntBASIC13.05□□□□□ -0.32
CEACAM3P40198 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM3P40198 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.05□□□□□ -0.32
CEACAM3P40198 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM3P40198 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM3P40198 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM3P40198 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM3P40198 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM3P40198 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CEACAM3P40198 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
CEACAM3P40198 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
CEACAM3P40198 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CEACAM3P40198 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM3P40198 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CEACAM3P40198 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CEACAM3P40198 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.04□□□□□ -0.32
CEACAM3P40198 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.04□□□□□ -0.32
CEACAM3P40198 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
CEACAM3P40198 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CEACAM3P40198 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.04□□□□□ -0.32
CEACAM3P40198 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CEACAM3P40198 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.04□□□□□ -0.32
CEACAM3P40198 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 AL139400.1-201ENST00000366220 510 ntBASIC13.04□□□□□ -0.32
CEACAM3P40198 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.04□□□□□ -0.32
CEACAM3P40198 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.04□□□□□ -0.32
CEACAM3P40198 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.04□□□□□ -0.32
CEACAM3P40198 AC069120.2-201ENST00000524091 540 ntBASIC13.04□□□□□ -0.32
CEACAM3P40198 AC140878.1-201ENST00000565277 250 ntBASIC13.04□□□□□ -0.32
CEACAM3P40198 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.04□□□□□ -0.32
CEACAM3P40198 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.04□□□□□ -0.32
CEACAM3P40198 AC093028.1-201ENST00000622998 982 ntBASIC13.04□□□□□ -0.32
CEACAM3P40198 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
CEACAM3P40198 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CEACAM3P40198 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CEACAM3P40198 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms