Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL15A1P39059 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
COL15A1P39059 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC19.95■□□□□ 0.78
COL15A1P39059 C2orf27AP3-201ENST00000434123 579 ntBASIC19.95■□□□□ 0.78
COL15A1P39059 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC19.95■□□□□ 0.78
COL15A1P39059 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL15A1P39059 GOLGA2P4-201ENST00000441462 777 ntBASIC19.95■□□□□ 0.78
COL15A1P39059 TPI1-206ENST00000488464 791 ntTSL 5 BASIC19.95■□□□□ 0.78
COL15A1P39059 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
COL15A1P39059 AC025279.2-201ENST00000569730 653 ntBASIC19.95■□□□□ 0.78
COL15A1P39059 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC19.95■□□□□ 0.78
COL15A1P39059 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL15A1P39059 AL354718.3-201ENST00000616414 581 ntBASIC19.95■□□□□ 0.78
COL15A1P39059 CR382287.1-201ENST00000623954 586 ntBASIC19.95■□□□□ 0.78
COL15A1P39059 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.95■□□□□ 0.78
COL15A1P39059 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL15A1P39059 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL15A1P39059 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL15A1P39059 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.94■□□□□ 0.78
COL15A1P39059 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL15A1P39059 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
COL15A1P39059 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
COL15A1P39059 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL15A1P39059 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.94■□□□□ 0.78
COL15A1P39059 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL15A1P39059 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.94■□□□□ 0.78
COL15A1P39059 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.94■□□□□ 0.78
COL15A1P39059 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
COL15A1P39059 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC19.94■□□□□ 0.78
COL15A1P39059 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
COL15A1P39059 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.94■□□□□ 0.78
COL15A1P39059 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.94■□□□□ 0.78
COL15A1P39059 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL15A1P39059 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.94■□□□□ 0.78
COL15A1P39059 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
COL15A1P39059 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL15A1P39059 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL15A1P39059 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.94■□□□□ 0.78
COL15A1P39059 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC19.94■□□□□ 0.78
COL15A1P39059 AC006033.1-201ENST00000440505 426 ntBASIC19.94■□□□□ 0.78
COL15A1P39059 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.94■□□□□ 0.78
COL15A1P39059 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC19.94■□□□□ 0.78
COL15A1P39059 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL15A1P39059 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC19.94■□□□□ 0.78
COL15A1P39059 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.94■□□□□ 0.78
COL15A1P39059 ABBA01031663.1-201ENST00000635630 790 ntBASIC19.94■□□□□ 0.78
COL15A1P39059 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.94■□□□□ 0.78
COL15A1P39059 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.94■□□□□ 0.78
COL15A1P39059 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.94■□□□□ 0.78
COL15A1P39059 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL15A1P39059 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL15A1P39059 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL15A1P39059 PCDH8P1-201ENST00000428983 2773 ntBASIC19.93■□□□□ 0.78
COL15A1P39059 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL15A1P39059 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL15A1P39059 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL15A1P39059 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL15A1P39059 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL15A1P39059 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL15A1P39059 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL15A1P39059 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
COL15A1P39059 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC19.93■□□□□ 0.78
COL15A1P39059 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL15A1P39059 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC19.93■□□□□ 0.78
COL15A1P39059 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL15A1P39059 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.93■□□□□ 0.78
COL15A1P39059 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.93■□□□□ 0.78
COL15A1P39059 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL15A1P39059 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.93■□□□□ 0.78
COL15A1P39059 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
COL15A1P39059 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC19.93■□□□□ 0.78
COL15A1P39059 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC19.93■□□□□ 0.78
COL15A1P39059 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL15A1P39059 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC19.93■□□□□ 0.78
COL15A1P39059 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC19.93■□□□□ 0.78
COL15A1P39059 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
COL15A1P39059 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.93■□□□□ 0.78
COL15A1P39059 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC19.93■□□□□ 0.78
COL15A1P39059 AC093813.1-201ENST00000605066 256 ntBASIC19.93■□□□□ 0.78
COL15A1P39059 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC19.93■□□□□ 0.78
COL15A1P39059 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
COL15A1P39059 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL15A1P39059 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL15A1P39059 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC19.93■□□□□ 0.78
COL15A1P39059 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
COL15A1P39059 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.92■□□□□ 0.78
COL15A1P39059 AC092364.2-201ENST00000596710 2692 ntBASIC19.92■□□□□ 0.78
COL15A1P39059 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL15A1P39059 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL15A1P39059 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.92■□□□□ 0.78
COL15A1P39059 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL15A1P39059 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL15A1P39059 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL15A1P39059 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL15A1P39059 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
COL15A1P39059 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.92■□□□□ 0.78
COL15A1P39059 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL15A1P39059 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL15A1P39059 ACKR1-201ENST00000368121 1240 ntBASIC19.92■□□□□ 0.78
COL15A1P39059 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms