Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
TM4SF1P30408 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TM4SF1P30408 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TM4SF1P30408 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.45■□□□□ 0.7
TM4SF1P30408 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF1P30408 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF1P30408 AC011676.5-201ENST00000624864 2660 ntBASIC19.45■□□□□ 0.7
TM4SF1P30408 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.45■□□□□ 0.7
TM4SF1P30408 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF1P30408 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF1P30408 SMS-201ENST00000379404 1174 ntTSL 3 BASIC19.45■□□□□ 0.7
TM4SF1P30408 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
TM4SF1P30408 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC19.45■□□□□ 0.7
TM4SF1P30408 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF1P30408 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC19.45■□□□□ 0.7
TM4SF1P30408 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF1P30408 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
TM4SF1P30408 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF1P30408 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF1P30408 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TM4SF1P30408 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF1P30408 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF1P30408 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF1P30408 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF1P30408 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.44■□□□□ 0.7
TM4SF1P30408 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF1P30408 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF1P30408 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF1P30408 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF1P30408 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.44■□□□□ 0.7
TM4SF1P30408 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TM4SF1P30408 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF1P30408 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF1P30408 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF1P30408 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF1P30408 SDCCAG3P2-201ENST00000326105 1023 ntBASIC19.44■□□□□ 0.7
TM4SF1P30408 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF1P30408 TISP43-201ENST00000409793 538 ntTSL 4 BASIC19.44■□□□□ 0.7
TM4SF1P30408 DEF8-202ENST00000418391 852 ntTSL 2 BASIC19.44■□□□□ 0.7
TM4SF1P30408 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC19.44■□□□□ 0.7
TM4SF1P30408 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF1P30408 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC19.44■□□□□ 0.7
TM4SF1P30408 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC19.44■□□□□ 0.7
TM4SF1P30408 RNF41-210ENST00000552244 716 ntTSL 3 BASIC19.44■□□□□ 0.7
TM4SF1P30408 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
TM4SF1P30408 NAT9-222ENST00000583476 583 ntTSL 3 BASIC19.44■□□□□ 0.7
TM4SF1P30408 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF1P30408 KLK3-207ENST00000595952 969 ntTSL 3 BASIC19.44■□□□□ 0.7
TM4SF1P30408 AC244157.2-201ENST00000616239 1006 ntBASIC19.44■□□□□ 0.7
TM4SF1P30408 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF1P30408 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
TM4SF1P30408 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TM4SF1P30408 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TM4SF1P30408 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.44■□□□□ 0.7
TM4SF1P30408 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF1P30408 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF1P30408 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF1P30408 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF1P30408 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF1P30408 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TM4SF1P30408 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TM4SF1P30408 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TM4SF1P30408 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC19.43■□□□□ 0.7
TM4SF1P30408 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TM4SF1P30408 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TM4SF1P30408 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TM4SF1P30408 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TM4SF1P30408 HNRNPA1P63-201ENST00000427917 963 ntBASIC19.43■□□□□ 0.7
TM4SF1P30408 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC19.43■□□□□ 0.7
TM4SF1P30408 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC19.43■□□□□ 0.7
TM4SF1P30408 AC044849.1-201ENST00000519737 1188 ntBASIC19.43■□□□□ 0.7
TM4SF1P30408 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.43■□□□□ 0.7
TM4SF1P30408 SPCS2P2-201ENST00000603270 608 ntBASIC19.43■□□□□ 0.7
TM4SF1P30408 AC091812.3-201ENST00000621362 345 ntBASIC19.43■□□□□ 0.7
TM4SF1P30408 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM4SF1P30408 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM4SF1P30408 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TM4SF1P30408 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TM4SF1P30408 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM4SF1P30408 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM4SF1P30408 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM4SF1P30408 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TM4SF1P30408 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TM4SF1P30408 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF1P30408 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.42■□□□□ 0.7
TM4SF1P30408 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF1P30408 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF1P30408 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF1P30408 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF1P30408 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF1P30408 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF1P30408 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF1P30408 B9D1-203ENST00000395615 805 ntTSL 3 BASIC19.42■□□□□ 0.7
TM4SF1P30408 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF1P30408 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC19.42■□□□□ 0.7
TM4SF1P30408 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC19.42■□□□□ 0.7
TM4SF1P30408 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC19.42■□□□□ 0.7
TM4SF1P30408 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC19.42■□□□□ 0.7
TM4SF1P30408 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC19.42■□□□□ 0.7
TM4SF1P30408 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms