Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB3BP20337 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB3BP20337 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB3BP20337 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB3BP20337 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB3BP20337 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB3BP20337 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.03□□□□□ -0.16
RAB3BP20337 AC093724.1-201ENST00000448659 1027 ntBASIC14.03□□□□□ -0.16
RAB3BP20337 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB3BP20337 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB3BP20337 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.03□□□□□ -0.16
RAB3BP20337 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.03□□□□□ -0.16
RAB3BP20337 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.03□□□□□ -0.16
RAB3BP20337 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.03□□□□□ -0.16
RAB3BP20337 AC091076.1-201ENST00000610741 619 ntBASIC14.03□□□□□ -0.16
RAB3BP20337 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB3BP20337 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB3BP20337 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB3BP20337 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB3BP20337 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RAB3BP20337 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB3BP20337 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB3BP20337 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB3BP20337 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB3BP20337 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB3BP20337 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB3BP20337 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB3BP20337 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB3BP20337 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
RAB3BP20337 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB3BP20337 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RAB3BP20337 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB3BP20337 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
RAB3BP20337 AC139749.1-202ENST00000617529 3139 ntBASIC14.02□□□□□ -0.16
RAB3BP20337 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB3BP20337 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAB3BP20337 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAB3BP20337 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB3BP20337 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
RAB3BP20337 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB3BP20337 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
RAB3BP20337 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
RAB3BP20337 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB3BP20337 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.02□□□□□ -0.16
RAB3BP20337 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.02□□□□□ -0.16
RAB3BP20337 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.02□□□□□ -0.16
RAB3BP20337 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAB3BP20337 AC126365.1-201ENST00000578585 1514 ntBASIC14.02□□□□□ -0.16
RAB3BP20337 KRT8P44-201ENST00000441609 1350 ntBASIC14.02□□□□□ -0.17
RAB3BP20337 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB3BP20337 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB3BP20337 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.02□□□□□ -0.17
RAB3BP20337 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB3BP20337 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.02□□□□□ -0.17
RAB3BP20337 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.02□□□□□ -0.17
RAB3BP20337 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB3BP20337 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB3BP20337 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB3BP20337 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
RAB3BP20337 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.02□□□□□ -0.17
RAB3BP20337 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.02□□□□□ -0.17
RAB3BP20337 AC138894.3-201ENST00000603787 634 ntBASIC14.02□□□□□ -0.17
RAB3BP20337 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.02□□□□□ -0.17
RAB3BP20337 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.02□□□□□ -0.17
RAB3BP20337 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB3BP20337 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB3BP20337 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB3BP20337 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB3BP20337 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
RAB3BP20337 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.02□□□□□ -0.17
RAB3BP20337 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB3BP20337 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB3BP20337 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB3BP20337 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB3BP20337 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB3BP20337 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB3BP20337 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB3BP20337 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
RAB3BP20337 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.17
RAB3BP20337 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB3BP20337 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB3BP20337 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RAB3BP20337 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB3BP20337 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB3BP20337 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB3BP20337 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB3BP20337 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB3BP20337 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB3BP20337 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB3BP20337 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RAB3BP20337 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
RAB3BP20337 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB3BP20337 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.01□□□□□ -0.17
RAB3BP20337 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB3BP20337 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB3BP20337 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.01□□□□□ -0.17
RAB3BP20337 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB3BP20337 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB3BP20337 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RAB3BP20337 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms