Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.53■□□□□ 0.4
SMPD1P17405 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMPD1P17405 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMPD1P17405 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.53■□□□□ 0.4
SMPD1P17405 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMPD1P17405 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMPD1P17405 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SMPD1P17405 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMPD1P17405 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMPD1P17405 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.53■□□□□ 0.4
SMPD1P17405 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.53■□□□□ 0.4
SMPD1P17405 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMPD1P17405 DUX4L45-201ENST00000566406 1057 ntBASIC17.53■□□□□ 0.4
SMPD1P17405 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.53■□□□□ 0.4
SMPD1P17405 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMPD1P17405 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMPD1P17405 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMPD1P17405 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMPD1P17405 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.53■□□□□ 0.4
SMPD1P17405 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMPD1P17405 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.53■□□□□ 0.4
SMPD1P17405 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMPD1P17405 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.53■□□□□ 0.4
SMPD1P17405 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.53■□□□□ 0.4
SMPD1P17405 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMPD1P17405 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMPD1P17405 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMPD1P17405 AD000864.1-201ENST00000624076 2295 ntBASIC17.52■□□□□ 0.4
SMPD1P17405 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.52■□□□□ 0.4
SMPD1P17405 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMPD1P17405 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMPD1P17405 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMPD1P17405 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.52■□□□□ 0.4
SMPD1P17405 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMPD1P17405 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.52■□□□□ 0.4
SMPD1P17405 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.52■□□□□ 0.4
SMPD1P17405 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SMPD1P17405 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMPD1P17405 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.52■□□□□ 0.4
SMPD1P17405 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.52■□□□□ 0.4
SMPD1P17405 PFN1P12-201ENST00000455938 534 ntBASIC17.52■□□□□ 0.4
SMPD1P17405 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMPD1P17405 AC099548.2-209ENST00000480264 625 ntBASIC17.52■□□□□ 0.4
SMPD1P17405 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.52■□□□□ 0.4
SMPD1P17405 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.52■□□□□ 0.4
SMPD1P17405 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.52■□□□□ 0.4
SMPD1P17405 RN7SL560P-201ENST00000577943 264 ntBASIC17.52■□□□□ 0.4
SMPD1P17405 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMPD1P17405 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
SMPD1P17405 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMPD1P17405 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.52■□□□□ 0.39
SMPD1P17405 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMPD1P17405 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SMPD1P17405 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.52■□□□□ 0.39
SMPD1P17405 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMPD1P17405 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
SMPD1P17405 AC018695.7-201ENST00000624587 2492 ntBASIC17.52■□□□□ 0.39
SMPD1P17405 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.52■□□□□ 0.39
SMPD1P17405 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMPD1P17405 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.51■□□□□ 0.39
SMPD1P17405 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMPD1P17405 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SMPD1P17405 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMPD1P17405 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.51■□□□□ 0.39
SMPD1P17405 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMPD1P17405 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.51■□□□□ 0.39
SMPD1P17405 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.51■□□□□ 0.39
SMPD1P17405 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
SMPD1P17405 AC092364.2-201ENST00000596710 2692 ntBASIC17.51■□□□□ 0.39
SMPD1P17405 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SMPD1P17405 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMPD1P17405 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMPD1P17405 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SMPD1P17405 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SMPD1P17405 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SMPD1P17405 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMPD1P17405 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.51■□□□□ 0.39
SMPD1P17405 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SMPD1P17405 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.51■□□□□ 0.39
SMPD1P17405 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.51■□□□□ 0.39
SMPD1P17405 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.51■□□□□ 0.39
SMPD1P17405 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.51■□□□□ 0.39
SMPD1P17405 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMPD1P17405 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.51■□□□□ 0.39
SMPD1P17405 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.51■□□□□ 0.39
SMPD1P17405 AC079328.2-201ENST00000561241 3354 ntBASIC17.51■□□□□ 0.39
SMPD1P17405 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.51■□□□□ 0.39
SMPD1P17405 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.51■□□□□ 0.39
SMPD1P17405 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.51■□□□□ 0.39
SMPD1P17405 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.51■□□□□ 0.39
SMPD1P17405 AP005019.2-201ENST00000615104 511 ntBASIC17.51■□□□□ 0.39
SMPD1P17405 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.51■□□□□ 0.39
SMPD1P17405 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMPD1P17405 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.51■□□□□ 0.39
SMPD1P17405 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMPD1P17405 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.5■□□□□ 0.39
SMPD1P17405 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.5■□□□□ 0.39
SMPD1P17405 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.5■□□□□ 0.39
SMPD1P17405 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMPD1P17405 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms