Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC130P13994 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCDC130P13994 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC130P13994 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC130P13994 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC130P13994 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC130P13994 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC130P13994 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC130P13994 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC130P13994 MST1L-201ENST00000442552 2185 ntBASIC16.85■□□□□ 0.29
CCDC130P13994 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCDC130P13994 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC130P13994 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC130P13994 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC130P13994 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CCDC130P13994 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC130P13994 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC130P13994 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC130P13994 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC130P13994 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC130P13994 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC130P13994 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC130P13994 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC130P13994 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC130P13994 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC130P13994 TARDBPP1-201ENST00000442013 1203 ntBASIC16.85■□□□□ 0.29
CCDC130P13994 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC130P13994 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC130P13994 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC130P13994 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.85■□□□□ 0.29
CCDC130P13994 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC130P13994 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC130P13994 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC130P13994 LINC01115-203ENST00000606068 577 ntBASIC16.85■□□□□ 0.29
CCDC130P13994 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.85■□□□□ 0.29
CCDC130P13994 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.85■□□□□ 0.29
CCDC130P13994 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.85■□□□□ 0.29
CCDC130P13994 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.85■□□□□ 0.29
CCDC130P13994 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
CCDC130P13994 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC130P13994 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC130P13994 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC130P13994 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC130P13994 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC130P13994 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC130P13994 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC130P13994 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
CCDC130P13994 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC130P13994 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC130P13994 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC130P13994 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC130P13994 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC130P13994 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
CCDC130P13994 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC130P13994 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
CCDC130P13994 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC130P13994 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC130P13994 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC130P13994 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC130P13994 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCDC130P13994 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC130P13994 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
CCDC130P13994 AC114501.2-201ENST00000439631 535 ntBASIC16.84■□□□□ 0.29
CCDC130P13994 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC130P13994 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.84■□□□□ 0.29
CCDC130P13994 AL589987.1-201ENST00000453380 819 ntBASIC16.84■□□□□ 0.29
CCDC130P13994 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC130P13994 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC130P13994 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC130P13994 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.84■□□□□ 0.29
CCDC130P13994 AC097359.3-201ENST00000603982 1210 ntBASIC16.84■□□□□ 0.29
CCDC130P13994 AC074044.1-201ENST00000609673 707 ntBASIC16.84■□□□□ 0.29
CCDC130P13994 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC130P13994 AC008761.3-201ENST00000624803 892 ntBASIC16.84■□□□□ 0.29
CCDC130P13994 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC130P13994 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC130P13994 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC130P13994 BTBD7P1-201ENST00000447253 1453 ntBASIC16.84■□□□□ 0.29
CCDC130P13994 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC130P13994 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC130P13994 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCDC130P13994 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC130P13994 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC130P13994 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCDC130P13994 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CCDC130P13994 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CCDC130P13994 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC130P13994 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC130P13994 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC130P13994 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC130P13994 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC130P13994 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC130P13994 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC130P13994 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC130P13994 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC130P13994 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC130P13994 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC130P13994 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC130P13994 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC130P13994 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms