Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.04□□□□□ -0.32
DEFA4P12838 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.04□□□□□ -0.32
DEFA4P12838 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
DEFA4P12838 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
DEFA4P12838 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.04□□□□□ -0.32
DEFA4P12838 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.04□□□□□ -0.32
DEFA4P12838 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
DEFA4P12838 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.04□□□□□ -0.32
DEFA4P12838 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
DEFA4P12838 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
DEFA4P12838 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
DEFA4P12838 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
DEFA4P12838 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
DEFA4P12838 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.04□□□□□ -0.32
DEFA4P12838 AC022532.1-201ENST00000624563 1728 ntBASIC13.04□□□□□ -0.32
DEFA4P12838 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
DEFA4P12838 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
DEFA4P12838 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
DEFA4P12838 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
DEFA4P12838 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
DEFA4P12838 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
DEFA4P12838 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
DEFA4P12838 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.04□□□□□ -0.32
DEFA4P12838 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.04□□□□□ -0.32
DEFA4P12838 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 AC067750.1-201ENST00000608826 6545 ntBASIC13.03□□□□□ -0.32
DEFA4P12838 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.03□□□□□ -0.32
DEFA4P12838 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.03□□□□□ -0.32
DEFA4P12838 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.03□□□□□ -0.32
DEFA4P12838 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.03□□□□□ -0.32
DEFA4P12838 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.03□□□□□ -0.32
DEFA4P12838 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
DEFA4P12838 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 RNU1-129P-201ENST00000384064 167 ntBASIC13.03□□□□□ -0.32
DEFA4P12838 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
DEFA4P12838 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
DEFA4P12838 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
DEFA4P12838 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.03□□□□□ -0.32
DEFA4P12838 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
DEFA4P12838 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.03□□□□□ -0.32
DEFA4P12838 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.03□□□□□ -0.32
DEFA4P12838 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.03□□□□□ -0.32
DEFA4P12838 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 U1.21-201ENST00000580816 167 ntBASIC13.03□□□□□ -0.32
DEFA4P12838 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.03□□□□□ -0.32
DEFA4P12838 AC023141.13-201ENST00000604991 943 ntBASIC13.03□□□□□ -0.32
DEFA4P12838 Z83851.2-201ENST00000609564 659 ntBASIC13.03□□□□□ -0.32
DEFA4P12838 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 AC136621.1-201ENST00000624017 2304 ntBASIC13.03□□□□□ -0.32
DEFA4P12838 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
DEFA4P12838 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.03□□□□□ -0.32
DEFA4P12838 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
DEFA4P12838 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.03□□□□□ -0.32
DEFA4P12838 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.03□□□□□ -0.32
DEFA4P12838 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.03□□□□□ -0.32
DEFA4P12838 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
DEFA4P12838 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.03□□□□□ -0.32
DEFA4P12838 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.32
DEFA4P12838 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
DEFA4P12838 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
DEFA4P12838 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.02□□□□□ -0.32
DEFA4P12838 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.02□□□□□ -0.32
DEFA4P12838 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
DEFA4P12838 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
DEFA4P12838 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
DEFA4P12838 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
DEFA4P12838 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
DEFA4P12838 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
DEFA4P12838 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
DEFA4P12838 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.02□□□□□ -0.32
DEFA4P12838 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
DEFA4P12838 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
DEFA4P12838 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.02□□□□□ -0.33
DEFA4P12838 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
DEFA4P12838 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
DEFA4P12838 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
DEFA4P12838 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms