Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBL4AP11441 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBL4AP11441 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBL4AP11441 AC004461.1-201ENST00000412461 403 ntBASIC14.82□□□□□ -0.04
UBL4AP11441 AC211486.1-202ENST00000416371 468 ntBASIC14.82□□□□□ -0.04
UBL4AP11441 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.82□□□□□ -0.04
UBL4AP11441 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.82□□□□□ -0.04
UBL4AP11441 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.82□□□□□ -0.04
UBL4AP11441 AC211476.1-201ENST00000503899 468 ntBASIC14.82□□□□□ -0.04
UBL4AP11441 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.82□□□□□ -0.04
UBL4AP11441 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.82□□□□□ -0.04
UBL4AP11441 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.82□□□□□ -0.04
UBL4AP11441 AC004835.2-201ENST00000603762 682 ntBASIC14.82□□□□□ -0.04
UBL4AP11441 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBL4AP11441 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
UBL4AP11441 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBL4AP11441 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBL4AP11441 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBL4AP11441 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBL4AP11441 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBL4AP11441 AC112504.1-201ENST00000623415 1841 ntBASIC14.82□□□□□ -0.04
UBL4AP11441 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBL4AP11441 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBL4AP11441 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBL4AP11441 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
UBL4AP11441 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
UBL4AP11441 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBL4AP11441 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBL4AP11441 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
UBL4AP11441 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBL4AP11441 AP001282.1-201ENST00000531301 1499 ntBASIC14.82□□□□□ -0.04
UBL4AP11441 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.82□□□□□ -0.04
UBL4AP11441 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.82□□□□□ -0.04
UBL4AP11441 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
UBL4AP11441 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBL4AP11441 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBL4AP11441 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBL4AP11441 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBL4AP11441 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBL4AP11441 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBL4AP11441 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.81□□□□□ -0.04
UBL4AP11441 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
UBL4AP11441 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBL4AP11441 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBL4AP11441 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
UBL4AP11441 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBL4AP11441 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBL4AP11441 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
UBL4AP11441 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBL4AP11441 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBL4AP11441 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBL4AP11441 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBL4AP11441 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBL4AP11441 KRT18P13-201ENST00000400056 1290 ntBASIC14.81□□□□□ -0.04
UBL4AP11441 AL627223.1-201ENST00000416693 442 ntBASIC14.81□□□□□ -0.04
UBL4AP11441 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.81□□□□□ -0.04
UBL4AP11441 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.81□□□□□ -0.04
UBL4AP11441 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.81□□□□□ -0.04
UBL4AP11441 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.81□□□□□ -0.04
UBL4AP11441 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.81□□□□□ -0.04
UBL4AP11441 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBL4AP11441 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.81□□□□□ -0.04
UBL4AP11441 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.81□□□□□ -0.04
UBL4AP11441 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.81□□□□□ -0.04
UBL4AP11441 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.81□□□□□ -0.04
UBL4AP11441 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.81□□□□□ -0.04
UBL4AP11441 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
UBL4AP11441 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBL4AP11441 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBL4AP11441 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.81□□□□□ -0.04
UBL4AP11441 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
UBL4AP11441 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBL4AP11441 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBL4AP11441 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
UBL4AP11441 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
UBL4AP11441 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.81□□□□□ -0.04
UBL4AP11441 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
UBL4AP11441 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
UBL4AP11441 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBL4AP11441 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.8□□□□□ -0.04
UBL4AP11441 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBL4AP11441 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBL4AP11441 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.8□□□□□ -0.04
UBL4AP11441 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.8□□□□□ -0.04
UBL4AP11441 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.8□□□□□ -0.04
UBL4AP11441 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBL4AP11441 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.8□□□□□ -0.04
UBL4AP11441 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBL4AP11441 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBL4AP11441 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.8□□□□□ -0.04
UBL4AP11441 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.8□□□□□ -0.04
UBL4AP11441 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBL4AP11441 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.8□□□□□ -0.04
UBL4AP11441 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.8□□□□□ -0.04
UBL4AP11441 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.8□□□□□ -0.04
UBL4AP11441 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBL4AP11441 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.8□□□□□ -0.04
UBL4AP11441 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBL4AP11441 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.8□□□□□ -0.04
UBL4AP11441 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms