Protein–RNA interactions for Protein: P04179

SOD2, Superoxide dismutase [Mn], mitochondrial, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2P04179 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOD2P04179 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.64■□□□□ 0.25
SOD2P04179 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOD2P04179 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.63■□□□□ 0.25
SOD2P04179 AD000864.1-201ENST00000624076 2295 ntBASIC16.63■□□□□ 0.25
SOD2P04179 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SOD2P04179 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOD2P04179 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SOD2P04179 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOD2P04179 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOD2P04179 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOD2P04179 BRWD1P1-201ENST00000401091 371 ntBASIC16.63■□□□□ 0.25
SOD2P04179 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SOD2P04179 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.63■□□□□ 0.25
SOD2P04179 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.63■□□□□ 0.25
SOD2P04179 C2orf27AP3-201ENST00000434123 579 ntBASIC16.63■□□□□ 0.25
SOD2P04179 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.63■□□□□ 0.25
SOD2P04179 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.63■□□□□ 0.25
SOD2P04179 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.63■□□□□ 0.25
SOD2P04179 AL354718.3-201ENST00000616414 581 ntBASIC16.63■□□□□ 0.25
SOD2P04179 CR382287.1-201ENST00000623954 586 ntBASIC16.63■□□□□ 0.25
SOD2P04179 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.63■□□□□ 0.25
SOD2P04179 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOD2P04179 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOD2P04179 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.63■□□□□ 0.25
SOD2P04179 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SOD2P04179 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SOD2P04179 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOD2P04179 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SOD2P04179 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SOD2P04179 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.63■□□□□ 0.25
SOD2P04179 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.63■□□□□ 0.25
SOD2P04179 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOD2P04179 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SOD2P04179 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOD2P04179 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SOD2P04179 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOD2P04179 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOD2P04179 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOD2P04179 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SOD2P04179 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOD2P04179 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOD2P04179 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.62■□□□□ 0.25
SOD2P04179 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOD2P04179 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOD2P04179 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SOD2P04179 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOD2P04179 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.62■□□□□ 0.25
SOD2P04179 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SOD2P04179 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.62■□□□□ 0.25
SOD2P04179 YBX1P6-201ENST00000442962 1002 ntBASIC16.62■□□□□ 0.25
SOD2P04179 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.62■□□□□ 0.25
SOD2P04179 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.62■□□□□ 0.25
SOD2P04179 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.62■□□□□ 0.25
SOD2P04179 GAPDHP40-201ENST00000505218 1006 ntBASIC16.62■□□□□ 0.25
SOD2P04179 AP001582.1-201ENST00000525856 295 ntBASIC16.62■□□□□ 0.25
SOD2P04179 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.62■□□□□ 0.25
SOD2P04179 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.62■□□□□ 0.25
SOD2P04179 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.62■□□□□ 0.25
SOD2P04179 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SOD2P04179 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOD2P04179 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
SOD2P04179 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOD2P04179 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOD2P04179 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOD2P04179 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOD2P04179 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.62■□□□□ 0.25
SOD2P04179 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.62■□□□□ 0.25
SOD2P04179 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SOD2P04179 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SOD2P04179 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOD2P04179 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOD2P04179 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOD2P04179 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOD2P04179 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOD2P04179 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOD2P04179 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.61■□□□□ 0.25
SOD2P04179 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOD2P04179 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOD2P04179 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOD2P04179 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOD2P04179 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SOD2P04179 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.61■□□□□ 0.25
SOD2P04179 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOD2P04179 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.61■□□□□ 0.25
SOD2P04179 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.61■□□□□ 0.25
SOD2P04179 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.61■□□□□ 0.25
SOD2P04179 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.61■□□□□ 0.25
SOD2P04179 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.61■□□□□ 0.25
SOD2P04179 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.61■□□□□ 0.25
SOD2P04179 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOD2P04179 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.61■□□□□ 0.25
SOD2P04179 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SOD2P04179 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOD2P04179 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOD2P04179 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOD2P04179 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.61■□□□□ 0.25
SOD2P04179 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOD2P04179 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.61■□□□□ 0.25
SOD2P04179 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms