Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC23.36■■□□□ 1.33
RAPGEF3O95398 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
RAPGEF3O95398 AC025181.2-201ENST00000606994 802 ntBASIC23.36■■□□□ 1.33
RAPGEF3O95398 AL023803.2-201ENST00000620080 638 ntBASIC23.36■■□□□ 1.33
RAPGEF3O95398 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RAPGEF3O95398 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RAPGEF3O95398 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RAPGEF3O95398 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RAPGEF3O95398 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC23.36■■□□□ 1.33
RAPGEF3O95398 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
RAPGEF3O95398 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RAPGEF3O95398 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
RAPGEF3O95398 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
RAPGEF3O95398 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC23.35■■□□□ 1.33
RAPGEF3O95398 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
RAPGEF3O95398 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC23.35■■□□□ 1.33
RAPGEF3O95398 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RAPGEF3O95398 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC23.35■■□□□ 1.33
RAPGEF3O95398 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RAPGEF3O95398 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RAPGEF3O95398 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC23.35■■□□□ 1.33
RAPGEF3O95398 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC23.35■■□□□ 1.33
RAPGEF3O95398 POM121L8P-201ENST00000417732 1281 ntBASIC23.35■■□□□ 1.33
RAPGEF3O95398 POM121L9P-203ENST00000441984 1285 ntBASIC23.35■■□□□ 1.33
RAPGEF3O95398 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC23.35■■□□□ 1.33
RAPGEF3O95398 IGLV3-15-201ENST00000518356 244 ntBASIC23.35■■□□□ 1.33
RAPGEF3O95398 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC23.35■■□□□ 1.33
RAPGEF3O95398 AC009084.3-201ENST00000623356 437 ntBASIC23.35■■□□□ 1.33
RAPGEF3O95398 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RAPGEF3O95398 AC004923.1-202ENST00000642106 209 ntBASIC23.35■■□□□ 1.33
RAPGEF3O95398 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC23.35■■□□□ 1.33
RAPGEF3O95398 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RAPGEF3O95398 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
RAPGEF3O95398 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RAPGEF3O95398 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC23.35■■□□□ 1.33
RAPGEF3O95398 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RAPGEF3O95398 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC23.34■■□□□ 1.33
RAPGEF3O95398 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
RAPGEF3O95398 AC078925.2-201ENST00000624013 1973 ntBASIC23.34■■□□□ 1.33
RAPGEF3O95398 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RAPGEF3O95398 LRRC59-203ENST00000576448 1531 ntBASIC23.34■■□□□ 1.33
RAPGEF3O95398 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RAPGEF3O95398 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC23.34■■□□□ 1.33
RAPGEF3O95398 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
RAPGEF3O95398 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RAPGEF3O95398 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RAPGEF3O95398 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RAPGEF3O95398 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
RAPGEF3O95398 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RAPGEF3O95398 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC23.34■■□□□ 1.33
RAPGEF3O95398 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
RAPGEF3O95398 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
RAPGEF3O95398 BANP-227ENST00000626016 2144 ntTSL 2 BASIC23.34■■□□□ 1.33
RAPGEF3O95398 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC23.34■■□□□ 1.33
RAPGEF3O95398 AC006453.1-201ENST00000636037 1257 ntBASIC23.34■■□□□ 1.33
RAPGEF3O95398 AL805961.1-201ENST00000642026 753 ntBASIC23.34■■□□□ 1.33
RAPGEF3O95398 LRRFIP1P1-201ENST00000498774 2246 ntBASIC23.34■■□□□ 1.33
RAPGEF3O95398 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RAPGEF3O95398 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RAPGEF3O95398 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
RAPGEF3O95398 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RAPGEF3O95398 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RAPGEF3O95398 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC23.34■■□□□ 1.33
RAPGEF3O95398 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
RAPGEF3O95398 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
RAPGEF3O95398 AC005052.1-201ENST00000625181 2492 ntBASIC23.34■■□□□ 1.33
RAPGEF3O95398 CYP51A1P3-201ENST00000400072 1428 ntBASIC23.33■■□□□ 1.33
RAPGEF3O95398 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RAPGEF3O95398 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC23.33■■□□□ 1.33
RAPGEF3O95398 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RAPGEF3O95398 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
RAPGEF3O95398 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC23.33■■□□□ 1.33
RAPGEF3O95398 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC23.33■■□□□ 1.33
RAPGEF3O95398 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
RAPGEF3O95398 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RAPGEF3O95398 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RAPGEF3O95398 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
RAPGEF3O95398 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
RAPGEF3O95398 PFN2-202ENST00000423691 911 ntTSL 2 BASIC23.33■■□□□ 1.33
RAPGEF3O95398 RN7SL8P-201ENST00000461771 266 ntBASIC23.33■■□□□ 1.33
RAPGEF3O95398 RTN3P1-201ENST00000536295 711 ntBASIC23.33■■□□□ 1.33
RAPGEF3O95398 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RAPGEF3O95398 AC092171.5-201ENST00000608012 942 ntBASIC23.33■■□□□ 1.33
RAPGEF3O95398 NEFHP1-201ENST00000412845 2629 ntBASIC23.33■■□□□ 1.33
RAPGEF3O95398 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
RAPGEF3O95398 AC105020.1-201ENST00000435356 2205 ntBASIC23.33■■□□□ 1.33
RAPGEF3O95398 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RAPGEF3O95398 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC23.33■■□□□ 1.32
RAPGEF3O95398 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RAPGEF3O95398 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC23.33■■□□□ 1.32
RAPGEF3O95398 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RAPGEF3O95398 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC23.32■■□□□ 1.32
RAPGEF3O95398 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC23.32■■□□□ 1.32
RAPGEF3O95398 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC23.32■■□□□ 1.32
RAPGEF3O95398 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
RAPGEF3O95398 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RAPGEF3O95398 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RAPGEF3O95398 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC23.32■■□□□ 1.32
RAPGEF3O95398 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
RAPGEF3O95398 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms