Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC13.87□□□□□ -0.19
CCNKO75909 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.87□□□□□ -0.19
CCNKO75909 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.87□□□□□ -0.19
CCNKO75909 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.87□□□□□ -0.19
CCNKO75909 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCNKO75909 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.87□□□□□ -0.19
CCNKO75909 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.87□□□□□ -0.19
CCNKO75909 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCNKO75909 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCNKO75909 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCNKO75909 AL023775.1-201ENST00000454907 1746 ntBASIC13.87□□□□□ -0.19
CCNKO75909 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CCNKO75909 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.87□□□□□ -0.19
CCNKO75909 KRT89P-201ENST00000620027 1478 ntBASIC13.87□□□□□ -0.19
CCNKO75909 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CCNKO75909 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC13.86□□□□□ -0.19
CCNKO75909 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.86□□□□□ -0.19
CCNKO75909 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CCNKO75909 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.86□□□□□ -0.19
CCNKO75909 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.86□□□□□ -0.19
CCNKO75909 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CCNKO75909 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CCNKO75909 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CCNKO75909 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.86□□□□□ -0.19
CCNKO75909 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CCNKO75909 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC13.86□□□□□ -0.19
CCNKO75909 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.86□□□□□ -0.19
CCNKO75909 NEK4P2-201ENST00000580004 1012 ntBASIC13.86□□□□□ -0.19
CCNKO75909 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.86□□□□□ -0.19
CCNKO75909 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.86□□□□□ -0.19
CCNKO75909 AC079602.3-201ENST00000623931 403 ntBASIC13.86□□□□□ -0.19
CCNKO75909 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.86□□□□□ -0.19
CCNKO75909 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CCNKO75909 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
CCNKO75909 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CCNKO75909 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CCNKO75909 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CCNKO75909 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 CYP2D8P-201ENST00000433633 1490 ntBASIC13.86□□□□□ -0.19
CCNKO75909 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.86□□□□□ -0.19
CCNKO75909 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CCNKO75909 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCNKO75909 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCNKO75909 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CCNKO75909 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.85□□□□□ -0.19
CCNKO75909 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCNKO75909 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCNKO75909 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.85□□□□□ -0.19
CCNKO75909 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.85□□□□□ -0.19
CCNKO75909 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.85□□□□□ -0.19
CCNKO75909 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCNKO75909 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.85□□□□□ -0.19
CCNKO75909 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCNKO75909 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCNKO75909 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCNKO75909 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
CCNKO75909 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CCNKO75909 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CCNKO75909 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.85□□□□□ -0.19
CCNKO75909 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
CCNKO75909 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCNKO75909 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13.85□□□□□ -0.19
CCNKO75909 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.85□□□□□ -0.19
CCNKO75909 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.85□□□□□ -0.19
CCNKO75909 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC13.85□□□□□ -0.19
CCNKO75909 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CCNKO75909 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.85□□□□□ -0.19
CCNKO75909 EGLN1P1-201ENST00000531623 762 ntBASIC13.85□□□□□ -0.19
CCNKO75909 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCNKO75909 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC13.85□□□□□ -0.19
CCNKO75909 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC13.85□□□□□ -0.19
CCNKO75909 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCNKO75909 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCNKO75909 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms