Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.06■□□□□ 0.16
GPC4O75487 AC022145.2-201ENST00000598203 171 ntBASIC16.06■□□□□ 0.16
GPC4O75487 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.06■□□□□ 0.16
GPC4O75487 AC023511.2-201ENST00000618803 211 ntBASIC16.06■□□□□ 0.16
GPC4O75487 SBF1P1-201ENST00000444527 5631 ntBASIC16.06■□□□□ 0.16
GPC4O75487 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GPC4O75487 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GPC4O75487 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
GPC4O75487 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
GPC4O75487 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GPC4O75487 AC126177.1-201ENST00000547829 2218 ntBASIC16.06■□□□□ 0.16
GPC4O75487 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GPC4O75487 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GPC4O75487 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GPC4O75487 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GPC4O75487 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.06■□□□□ 0.16
GPC4O75487 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GPC4O75487 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GPC4O75487 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
GPC4O75487 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
GPC4O75487 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
GPC4O75487 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GPC4O75487 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GPC4O75487 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
GPC4O75487 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GPC4O75487 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
GPC4O75487 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
GPC4O75487 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
GPC4O75487 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GPC4O75487 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.05■□□□□ 0.16
GPC4O75487 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.05■□□□□ 0.16
GPC4O75487 AC142381.1-201ENST00000426099 345 ntBASIC16.05■□□□□ 0.16
GPC4O75487 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.05■□□□□ 0.16
GPC4O75487 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.05■□□□□ 0.16
GPC4O75487 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.05■□□□□ 0.16
GPC4O75487 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.05■□□□□ 0.16
GPC4O75487 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
GPC4O75487 AP000842.3-202ENST00000569238 1080 ntBASIC16.05■□□□□ 0.16
GPC4O75487 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.05■□□□□ 0.16
GPC4O75487 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
GPC4O75487 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GPC4O75487 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GPC4O75487 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
GPC4O75487 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
GPC4O75487 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GPC4O75487 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
GPC4O75487 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
GPC4O75487 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.05■□□□□ 0.16
GPC4O75487 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.05■□□□□ 0.16
GPC4O75487 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.05■□□□□ 0.16
GPC4O75487 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GPC4O75487 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
GPC4O75487 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.05■□□□□ 0.16
GPC4O75487 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
GPC4O75487 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GPC4O75487 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GPC4O75487 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
GPC4O75487 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.04■□□□□ 0.16
GPC4O75487 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.04■□□□□ 0.16
GPC4O75487 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GPC4O75487 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.04■□□□□ 0.16
GPC4O75487 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GPC4O75487 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.04■□□□□ 0.16
GPC4O75487 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GPC4O75487 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
GPC4O75487 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.04■□□□□ 0.16
GPC4O75487 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
GPC4O75487 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.04■□□□□ 0.16
GPC4O75487 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GPC4O75487 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
GPC4O75487 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.04■□□□□ 0.16
GPC4O75487 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GPC4O75487 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.04■□□□□ 0.16
GPC4O75487 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.04■□□□□ 0.16
GPC4O75487 AC211486.1-202ENST00000416371 468 ntBASIC16.04■□□□□ 0.16
GPC4O75487 AL592309.1-201ENST00000443127 649 ntBASIC16.04■□□□□ 0.16
GPC4O75487 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.04■□□□□ 0.16
GPC4O75487 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
GPC4O75487 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.04■□□□□ 0.16
GPC4O75487 AC069335.1-201ENST00000489972 472 ntBASIC16.04■□□□□ 0.16
GPC4O75487 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GPC4O75487 AC211476.1-201ENST00000503899 468 ntBASIC16.04■□□□□ 0.16
GPC4O75487 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
GPC4O75487 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.04■□□□□ 0.16
GPC4O75487 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.04■□□□□ 0.16
GPC4O75487 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.04■□□□□ 0.16
GPC4O75487 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GPC4O75487 AC055717.3-201ENST00000622967 595 ntBASIC16.04■□□□□ 0.16
GPC4O75487 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.04■□□□□ 0.16
GPC4O75487 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
GPC4O75487 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GPC4O75487 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.04■□□□□ 0.16
GPC4O75487 CDC14C-201ENST00000428251 1719 ntBASIC16.04■□□□□ 0.16
GPC4O75487 AC144831.1-201ENST00000573312 2656 ntBASIC16.04■□□□□ 0.16
GPC4O75487 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.04■□□□□ 0.16
GPC4O75487 LINC02447-202ENST00000501888 2146 ntBASIC16.04■□□□□ 0.16
GPC4O75487 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.04■□□□□ 0.16
GPC4O75487 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GPC4O75487 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.04■□□□□ 0.16
GPC4O75487 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms