Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PRAMEF11O60813 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF11O60813 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.09■□□□□ 0.17
PRAMEF11O60813 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF11O60813 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF11O60813 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF11O60813 KRT18P64-201ENST00000434946 1219 ntBASIC16.09■□□□□ 0.17
PRAMEF11O60813 TSPY16P-201ENST00000449843 468 ntBASIC16.09■□□□□ 0.17
PRAMEF11O60813 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.09■□□□□ 0.17
PRAMEF11O60813 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.09■□□□□ 0.17
PRAMEF11O60813 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF11O60813 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF11O60813 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PRAMEF11O60813 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.09■□□□□ 0.17
PRAMEF11O60813 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF11O60813 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.09■□□□□ 0.17
PRAMEF11O60813 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.09■□□□□ 0.17
PRAMEF11O60813 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PRAMEF11O60813 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF11O60813 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF11O60813 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
PRAMEF11O60813 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF11O60813 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PRAMEF11O60813 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF11O60813 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
PRAMEF11O60813 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF11O60813 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PRAMEF11O60813 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.08■□□□□ 0.17
PRAMEF11O60813 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.08■□□□□ 0.17
PRAMEF11O60813 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
PRAMEF11O60813 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PRAMEF11O60813 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.08■□□□□ 0.17
PRAMEF11O60813 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
PRAMEF11O60813 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PRAMEF11O60813 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PRAMEF11O60813 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PRAMEF11O60813 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PRAMEF11O60813 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PRAMEF11O60813 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PRAMEF11O60813 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF11O60813 CICP13-201ENST00000422015 2789 ntBASIC16.08■□□□□ 0.16
PRAMEF11O60813 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF11O60813 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
PRAMEF11O60813 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF11O60813 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.08■□□□□ 0.16
PRAMEF11O60813 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PRAMEF11O60813 AC015922.1-201ENST00000421102 1152 ntBASIC16.08■□□□□ 0.16
PRAMEF11O60813 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.08■□□□□ 0.16
PRAMEF11O60813 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.08■□□□□ 0.16
PRAMEF11O60813 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.08■□□□□ 0.16
PRAMEF11O60813 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.08■□□□□ 0.16
PRAMEF11O60813 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
PRAMEF11O60813 AC104794.3-201ENST00000566840 1248 ntBASIC16.08■□□□□ 0.16
PRAMEF11O60813 SRD5A3P1-201ENST00000603021 949 ntBASIC16.08■□□□□ 0.16
PRAMEF11O60813 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.08■□□□□ 0.16
PRAMEF11O60813 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.08■□□□□ 0.16
PRAMEF11O60813 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.08■□□□□ 0.16
PRAMEF11O60813 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.08■□□□□ 0.16
PRAMEF11O60813 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.08■□□□□ 0.16
PRAMEF11O60813 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.08■□□□□ 0.16
PRAMEF11O60813 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF11O60813 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF11O60813 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF11O60813 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PRAMEF11O60813 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.08■□□□□ 0.16
PRAMEF11O60813 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF11O60813 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF11O60813 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF11O60813 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF11O60813 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.08■□□□□ 0.16
PRAMEF11O60813 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF11O60813 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.08■□□□□ 0.16
PRAMEF11O60813 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF11O60813 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.08■□□□□ 0.16
PRAMEF11O60813 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF11O60813 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.07■□□□□ 0.16
PRAMEF11O60813 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF11O60813 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF11O60813 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.07■□□□□ 0.16
PRAMEF11O60813 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.07■□□□□ 0.16
PRAMEF11O60813 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF11O60813 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PRAMEF11O60813 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.07■□□□□ 0.16
PRAMEF11O60813 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF11O60813 MIR661-201ENST00000384842 89 ntBASIC16.07■□□□□ 0.16
PRAMEF11O60813 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.07■□□□□ 0.16
PRAMEF11O60813 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.07■□□□□ 0.16
PRAMEF11O60813 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.07■□□□□ 0.16
PRAMEF11O60813 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.07■□□□□ 0.16
PRAMEF11O60813 TIMM17BP1-201ENST00000545713 516 ntBASIC16.07■□□□□ 0.16
PRAMEF11O60813 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.07■□□□□ 0.16
PRAMEF11O60813 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.07■□□□□ 0.16
PRAMEF11O60813 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF11O60813 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF11O60813 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.07■□□□□ 0.16
PRAMEF11O60813 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF11O60813 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.07■□□□□ 0.16
PRAMEF11O60813 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF11O60813 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.07■□□□□ 0.16
PRAMEF11O60813 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms