Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFRA3O60609 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFRA3O60609 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.24■□□□□ 0.03
GFRA3O60609 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
GFRA3O60609 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC15.24■□□□□ 0.03
GFRA3O60609 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFRA3O60609 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFRA3O60609 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFRA3O60609 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFRA3O60609 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFRA3O60609 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.24■□□□□ 0.03
GFRA3O60609 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GFRA3O60609 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFRA3O60609 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
GFRA3O60609 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFRA3O60609 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.24■□□□□ 0.03
GFRA3O60609 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.24■□□□□ 0.03
GFRA3O60609 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFRA3O60609 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
GFRA3O60609 AL357373.1-201ENST00000394974 322 ntBASIC15.24■□□□□ 0.03
GFRA3O60609 ACTBP8-201ENST00000403258 1108 ntBASIC15.24■□□□□ 0.03
GFRA3O60609 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.24■□□□□ 0.03
GFRA3O60609 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.24■□□□□ 0.03
GFRA3O60609 AC104073.2-201ENST00000453737 312 ntBASIC15.24■□□□□ 0.03
GFRA3O60609 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC15.24■□□□□ 0.03
GFRA3O60609 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC15.24■□□□□ 0.03
GFRA3O60609 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC15.24■□□□□ 0.03
GFRA3O60609 MIR4754-201ENST00000582477 89 ntBASIC15.24■□□□□ 0.03
GFRA3O60609 BNIP3P13-201ENST00000599968 566 ntBASIC15.24■□□□□ 0.03
GFRA3O60609 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.24■□□□□ 0.03
GFRA3O60609 BX539320.1-201ENST00000623759 877 ntBASIC15.24■□□□□ 0.03
GFRA3O60609 PRSS30P-206ENST00000641773 873 ntBASIC15.24■□□□□ 0.03
GFRA3O60609 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GFRA3O60609 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.24■□□□□ 0.03
GFRA3O60609 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.24■□□□□ 0.03
GFRA3O60609 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.24■□□□□ 0.03
GFRA3O60609 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFRA3O60609 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
GFRA3O60609 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFRA3O60609 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.24■□□□□ 0.03
GFRA3O60609 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.24■□□□□ 0.03
GFRA3O60609 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFRA3O60609 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFRA3O60609 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.24■□□□□ 0.03
GFRA3O60609 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFRA3O60609 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
GFRA3O60609 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.24■□□□□ 0.03
GFRA3O60609 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
GFRA3O60609 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.24■□□□□ 0.03
GFRA3O60609 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFRA3O60609 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GFRA3O60609 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFRA3O60609 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.23■□□□□ 0.03
GFRA3O60609 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GFRA3O60609 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFRA3O60609 AL512652.2-201ENST00000625156 1716 ntBASIC15.23■□□□□ 0.03
GFRA3O60609 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFRA3O60609 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFRA3O60609 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.23■□□□□ 0.03
GFRA3O60609 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
GFRA3O60609 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GFRA3O60609 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GFRA3O60609 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.23■□□□□ 0.03
GFRA3O60609 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFRA3O60609 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFRA3O60609 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFRA3O60609 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFRA3O60609 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFRA3O60609 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.23■□□□□ 0.03
GFRA3O60609 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
GFRA3O60609 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFRA3O60609 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFRA3O60609 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC15.23■□□□□ 0.03
GFRA3O60609 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15.23■□□□□ 0.03
GFRA3O60609 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GFRA3O60609 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC15.23■□□□□ 0.03
GFRA3O60609 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC15.23■□□□□ 0.03
GFRA3O60609 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC15.23■□□□□ 0.03
GFRA3O60609 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC15.23■□□□□ 0.03
GFRA3O60609 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC15.23■□□□□ 0.03
GFRA3O60609 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
GFRA3O60609 AL161773.1-201ENST00000624845 863 ntBASIC15.23■□□□□ 0.03
GFRA3O60609 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFRA3O60609 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.23■□□□□ 0.03
GFRA3O60609 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.23■□□□□ 0.03
GFRA3O60609 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.23■□□□□ 0.03
GFRA3O60609 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.23■□□□□ 0.03
GFRA3O60609 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFRA3O60609 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.22■□□□□ 0.03
GFRA3O60609 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFRA3O60609 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.22■□□□□ 0.03
GFRA3O60609 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GFRA3O60609 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFRA3O60609 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.22■□□□□ 0.03
GFRA3O60609 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
GFRA3O60609 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFRA3O60609 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFRA3O60609 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFRA3O60609 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GFRA3O60609 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms