Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
PDE6DO43924 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC12.41□□□□□ -0.42
PDE6DO43924 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.41□□□□□ -0.42
PDE6DO43924 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
PDE6DO43924 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
PDE6DO43924 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.41□□□□□ -0.42
PDE6DO43924 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
PDE6DO43924 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
PDE6DO43924 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.41□□□□□ -0.42
PDE6DO43924 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
PDE6DO43924 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6DO43924 AC140479.7-201ENST00000636301 2332 ntBASIC12.4□□□□□ -0.42
PDE6DO43924 AP001282.1-201ENST00000531301 1499 ntBASIC12.4□□□□□ -0.42
PDE6DO43924 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6DO43924 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6DO43924 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.4□□□□□ -0.42
PDE6DO43924 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.4□□□□□ -0.42
PDE6DO43924 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6DO43924 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.4□□□□□ -0.42
PDE6DO43924 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC12.4□□□□□ -0.42
PDE6DO43924 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
PDE6DO43924 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6DO43924 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6DO43924 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6DO43924 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.4□□□□□ -0.42
PDE6DO43924 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
PDE6DO43924 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6DO43924 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.4□□□□□ -0.42
PDE6DO43924 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6DO43924 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC12.4□□□□□ -0.42
PDE6DO43924 AC008550.1-201ENST00000511500 884 ntBASIC12.4□□□□□ -0.42
PDE6DO43924 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC12.4□□□□□ -0.42
PDE6DO43924 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC12.4□□□□□ -0.42
PDE6DO43924 AC005412.3-201ENST00000580309 715 ntBASIC12.4□□□□□ -0.42
PDE6DO43924 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.4□□□□□ -0.42
PDE6DO43924 LINC01023-201ENST00000606054 436 ntBASIC12.4□□□□□ -0.42
PDE6DO43924 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6DO43924 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
PDE6DO43924 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6DO43924 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
PDE6DO43924 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6DO43924 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6DO43924 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6DO43924 ZBED1P1-201ENST00000502364 1930 ntBASIC12.4□□□□□ -0.42
PDE6DO43924 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.4□□□□□ -0.42
PDE6DO43924 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6DO43924 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6DO43924 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6DO43924 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.4□□□□□ -0.42
PDE6DO43924 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6DO43924 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6DO43924 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.4□□□□□ -0.42
PDE6DO43924 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
PDE6DO43924 AC079776.2-201ENST00000641154 1609 ntBASIC12.4□□□□□ -0.42
PDE6DO43924 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.4□□□□□ -0.42
PDE6DO43924 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
PDE6DO43924 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.4□□□□□ -0.43
PDE6DO43924 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.4□□□□□ -0.43
PDE6DO43924 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
PDE6DO43924 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
PDE6DO43924 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.39□□□□□ -0.43
PDE6DO43924 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
PDE6DO43924 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.39□□□□□ -0.43
PDE6DO43924 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
PDE6DO43924 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
PDE6DO43924 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.39□□□□□ -0.43
PDE6DO43924 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
PDE6DO43924 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC12.39□□□□□ -0.43
PDE6DO43924 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 FUOM-202ENST00000368551 628 ntTSL 3 BASIC12.39□□□□□ -0.43
PDE6DO43924 VMO1-203ENST00000416307 712 ntTSL 2 BASIC12.39□□□□□ -0.43
PDE6DO43924 FAM8A3P-201ENST00000427218 844 ntBASIC12.39□□□□□ -0.43
PDE6DO43924 BX664615.1-201ENST00000443558 458 ntBASIC12.39□□□□□ -0.43
PDE6DO43924 LY6E-213ENST00000522528 606 ntTSL 3 BASIC12.39□□□□□ -0.43
PDE6DO43924 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC12.39□□□□□ -0.43
PDE6DO43924 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC12.39□□□□□ -0.43
PDE6DO43924 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms