Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE3O43900 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.26■□□□□ 0.03
PRICKLE3O43900 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE3O43900 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE3O43900 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE3O43900 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.26■□□□□ 0.03
PRICKLE3O43900 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
PRICKLE3O43900 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.26■□□□□ 0.03
PRICKLE3O43900 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
PRICKLE3O43900 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE3O43900 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE3O43900 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
PRICKLE3O43900 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.26■□□□□ 0.03
PRICKLE3O43900 SPTLC1P1-201ENST00000447199 261 ntBASIC15.26■□□□□ 0.03
PRICKLE3O43900 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.26■□□□□ 0.03
PRICKLE3O43900 AC138761.1-201ENST00000584393 385 ntBASIC15.26■□□□□ 0.03
PRICKLE3O43900 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PRICKLE3O43900 SRD5A3P1-201ENST00000603021 949 ntBASIC15.26■□□□□ 0.03
PRICKLE3O43900 AF228730.6-201ENST00000641497 218 ntBASIC15.26■□□□□ 0.03
PRICKLE3O43900 AC084121.3-201ENST00000641716 218 ntBASIC15.26■□□□□ 0.03
PRICKLE3O43900 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE3O43900 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PRICKLE3O43900 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.26■□□□□ 0.03
PRICKLE3O43900 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE3O43900 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE3O43900 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE3O43900 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE3O43900 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE3O43900 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE3O43900 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE3O43900 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
PRICKLE3O43900 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.26■□□□□ 0.03
PRICKLE3O43900 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE3O43900 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.26■□□□□ 0.03
PRICKLE3O43900 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE3O43900 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE3O43900 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRICKLE3O43900 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRICKLE3O43900 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.25■□□□□ 0.03
PRICKLE3O43900 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRICKLE3O43900 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRICKLE3O43900 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.25■□□□□ 0.03
PRICKLE3O43900 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PRICKLE3O43900 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRICKLE3O43900 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRICKLE3O43900 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRICKLE3O43900 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRICKLE3O43900 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRICKLE3O43900 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PRICKLE3O43900 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.25■□□□□ 0.03
PRICKLE3O43900 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRICKLE3O43900 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.25■□□□□ 0.03
PRICKLE3O43900 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRICKLE3O43900 KRT18P64-201ENST00000434946 1219 ntBASIC15.25■□□□□ 0.03
PRICKLE3O43900 AC002472.2-201ENST00000442739 958 ntBASIC15.25■□□□□ 0.03
PRICKLE3O43900 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.25■□□□□ 0.03
PRICKLE3O43900 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.25■□□□□ 0.03
PRICKLE3O43900 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.25■□□□□ 0.03
PRICKLE3O43900 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.25■□□□□ 0.03
PRICKLE3O43900 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PRICKLE3O43900 SERBP1P5-201ENST00000510079 1181 ntBASIC15.25■□□□□ 0.03
PRICKLE3O43900 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.25■□□□□ 0.03
PRICKLE3O43900 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRICKLE3O43900 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PRICKLE3O43900 MIR4745-201ENST00000577608 62 ntBASIC15.25■□□□□ 0.03
PRICKLE3O43900 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.25■□□□□ 0.03
PRICKLE3O43900 LINC02560-201ENST00000596379 459 ntBASIC15.25■□□□□ 0.03
PRICKLE3O43900 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.25■□□□□ 0.03
PRICKLE3O43900 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.25■□□□□ 0.03
PRICKLE3O43900 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.25■□□□□ 0.03
PRICKLE3O43900 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.25■□□□□ 0.03
PRICKLE3O43900 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRICKLE3O43900 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRICKLE3O43900 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PRICKLE3O43900 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
PRICKLE3O43900 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRICKLE3O43900 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
PRICKLE3O43900 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PRICKLE3O43900 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRICKLE3O43900 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.24■□□□□ 0.03
PRICKLE3O43900 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.24■□□□□ 0.03
PRICKLE3O43900 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRICKLE3O43900 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.24■□□□□ 0.03
PRICKLE3O43900 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
PRICKLE3O43900 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRICKLE3O43900 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRICKLE3O43900 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRICKLE3O43900 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.24■□□□□ 0.03
PRICKLE3O43900 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRICKLE3O43900 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRICKLE3O43900 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.24■□□□□ 0.03
PRICKLE3O43900 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRICKLE3O43900 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.24■□□□□ 0.03
PRICKLE3O43900 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRICKLE3O43900 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.24■□□□□ 0.03
PRICKLE3O43900 TOMM22P5-201ENST00000416399 439 ntBASIC15.24■□□□□ 0.03
PRICKLE3O43900 AL589987.1-201ENST00000453380 819 ntBASIC15.24■□□□□ 0.03
PRICKLE3O43900 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.24■□□□□ 0.03
PRICKLE3O43900 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.24■□□□□ 0.03
PRICKLE3O43900 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms