Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.42■□□□□ 0.06
SLC28A2O43868 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.42■□□□□ 0.06
SLC28A2O43868 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
SLC28A2O43868 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SLC28A2O43868 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SLC28A2O43868 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC28A2O43868 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.42■□□□□ 0.06
SLC28A2O43868 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SLC28A2O43868 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC28A2O43868 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC28A2O43868 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC28A2O43868 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC28A2O43868 AC024909.3-201ENST00000611513 2257 ntBASIC15.42■□□□□ 0.06
SLC28A2O43868 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC28A2O43868 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC28A2O43868 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.42■□□□□ 0.06
SLC28A2O43868 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SLC28A2O43868 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC28A2O43868 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC28A2O43868 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC28A2O43868 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC28A2O43868 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
SLC28A2O43868 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC28A2O43868 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC28A2O43868 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC28A2O43868 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.41■□□□□ 0.06
SLC28A2O43868 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SLC28A2O43868 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC28A2O43868 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC28A2O43868 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC28A2O43868 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SLC28A2O43868 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC28A2O43868 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC28A2O43868 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC28A2O43868 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC28A2O43868 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC28A2O43868 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC28A2O43868 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC28A2O43868 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC28A2O43868 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC28A2O43868 AL513477.1-201ENST00000602865 2407 ntBASIC15.41■□□□□ 0.06
SLC28A2O43868 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC28A2O43868 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC28A2O43868 AC112492.5-201ENST00000421897 457 ntBASIC15.41■□□□□ 0.06
SLC28A2O43868 TSSK5P-201ENST00000423978 907 ntBASIC15.41■□□□□ 0.06
SLC28A2O43868 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.41■□□□□ 0.06
SLC28A2O43868 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC28A2O43868 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.41■□□□□ 0.06
SLC28A2O43868 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SLC28A2O43868 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.41■□□□□ 0.06
SLC28A2O43868 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC28A2O43868 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.41■□□□□ 0.06
SLC28A2O43868 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC28A2O43868 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC28A2O43868 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC28A2O43868 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC28A2O43868 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC28A2O43868 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC28A2O43868 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC28A2O43868 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC28A2O43868 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC28A2O43868 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC28A2O43868 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC28A2O43868 AL596257.1-201ENST00000641463 2694 ntBASIC15.4■□□□□ 0.06
SLC28A2O43868 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.4■□□□□ 0.06
SLC28A2O43868 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
SLC28A2O43868 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC28A2O43868 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC28A2O43868 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
SLC28A2O43868 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC28A2O43868 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SLC28A2O43868 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SLC28A2O43868 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC28A2O43868 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
SLC28A2O43868 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 AC079776.1-201ENST00000401540 1152 ntBASIC15.4■□□□□ 0.06
SLC28A2O43868 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC28A2O43868 AL353779.1-201ENST00000434793 351 ntBASIC15.4■□□□□ 0.06
SLC28A2O43868 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SLC28A2O43868 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 AC011495.1-201ENST00000498085 584 ntBASIC15.4■□□□□ 0.06
SLC28A2O43868 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.4■□□□□ 0.06
SLC28A2O43868 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
SLC28A2O43868 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC28A2O43868 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC28A2O43868 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SLC28A2O43868 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms