Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.19■□□□□ 0.02
DUX1O43812 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DUX1O43812 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.19■□□□□ 0.02
DUX1O43812 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.19■□□□□ 0.02
DUX1O43812 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.19■□□□□ 0.02
DUX1O43812 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DUX1O43812 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.19■□□□□ 0.02
DUX1O43812 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DUX1O43812 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.19■□□□□ 0.02
DUX1O43812 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DUX1O43812 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DUX1O43812 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.19■□□□□ 0.02
DUX1O43812 AC022494.1-201ENST00000466044 728 ntBASIC15.19■□□□□ 0.02
DUX1O43812 KRT18P43-201ENST00000469825 1281 ntBASIC15.19■□□□□ 0.02
DUX1O43812 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.19■□□□□ 0.02
DUX1O43812 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
DUX1O43812 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.19■□□□□ 0.02
DUX1O43812 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.19■□□□□ 0.02
DUX1O43812 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
DUX1O43812 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.19■□□□□ 0.02
DUX1O43812 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DUX1O43812 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.19■□□□□ 0.02
DUX1O43812 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
DUX1O43812 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DUX1O43812 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DUX1O43812 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DUX1O43812 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.19■□□□□ 0.02
DUX1O43812 INTS4P2-202ENST00000614726 2019 ntBASIC15.19■□□□□ 0.02
DUX1O43812 AL607033.1-201ENST00000623900 1599 ntBASIC15.19■□□□□ 0.02
DUX1O43812 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.19■□□□□ 0.02
DUX1O43812 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DUX1O43812 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.19■□□□□ 0.02
DUX1O43812 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.19■□□□□ 0.02
DUX1O43812 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.19■□□□□ 0.02
DUX1O43812 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX1O43812 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.18■□□□□ 0.02
DUX1O43812 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
DUX1O43812 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
DUX1O43812 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
DUX1O43812 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX1O43812 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.18■□□□□ 0.02
DUX1O43812 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX1O43812 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX1O43812 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX1O43812 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
DUX1O43812 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
DUX1O43812 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX1O43812 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
DUX1O43812 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
DUX1O43812 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
DUX1O43812 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
DUX1O43812 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX1O43812 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.18■□□□□ 0.02
DUX1O43812 MIR658-201ENST00000385210 100 ntBASIC15.18■□□□□ 0.02
DUX1O43812 SOCS2P1-201ENST00000417727 557 ntBASIC15.18■□□□□ 0.02
DUX1O43812 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.18■□□□□ 0.02
DUX1O43812 AC134915.1-201ENST00000426461 574 ntBASIC15.18■□□□□ 0.02
DUX1O43812 KRT43P-201ENST00000434019 910 ntBASIC15.18■□□□□ 0.02
DUX1O43812 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.18■□□□□ 0.02
DUX1O43812 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.18■□□□□ 0.02
DUX1O43812 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.18■□□□□ 0.02
DUX1O43812 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.18■□□□□ 0.02
DUX1O43812 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
DUX1O43812 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX1O43812 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.18■□□□□ 0.02
DUX1O43812 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.18■□□□□ 0.02
DUX1O43812 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.18■□□□□ 0.02
DUX1O43812 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.18■□□□□ 0.02
DUX1O43812 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.18■□□□□ 0.02
DUX1O43812 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.18■□□□□ 0.02
DUX1O43812 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
DUX1O43812 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX1O43812 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.18■□□□□ 0.02
DUX1O43812 AC008735.3-201ENST00000596646 500 ntBASIC15.18■□□□□ 0.02
DUX1O43812 AL049840.4-201ENST00000602422 811 ntBASIC15.18■□□□□ 0.02
DUX1O43812 AC097359.3-201ENST00000603982 1210 ntBASIC15.18■□□□□ 0.02
DUX1O43812 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX1O43812 MIR6799-201ENST00000620297 69 ntBASIC15.18■□□□□ 0.02
DUX1O43812 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
DUX1O43812 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.18■□□□□ 0.02
DUX1O43812 AC079328.2-201ENST00000561241 3354 ntBASIC15.18■□□□□ 0.02
DUX1O43812 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX1O43812 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
DUX1O43812 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX1O43812 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.18■□□□□ 0.02
DUX1O43812 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX1O43812 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
DUX1O43812 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
DUX1O43812 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.18■□□□□ 0.02
DUX1O43812 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX1O43812 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX1O43812 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
DUX1O43812 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX1O43812 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.17■□□□□ 0.02
DUX1O43812 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.17■□□□□ 0.02
DUX1O43812 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.17■□□□□ 0.02
DUX1O43812 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.17■□□□□ 0.02
DUX1O43812 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DUX1O43812 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.17■□□□□ 0.02
DUX1O43812 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms