Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC087499.6-201ENST00000411576 835 ntBASIC16.02■□□□□ 0.16
SMAD6O43541 TOMM22P5-201ENST00000416399 439 ntBASIC16.02■□□□□ 0.16
SMAD6O43541 MEP1AP4-201ENST00000423244 1087 ntBASIC16.02■□□□□ 0.16
SMAD6O43541 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.02■□□□□ 0.16
SMAD6O43541 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.02■□□□□ 0.16
SMAD6O43541 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.02■□□□□ 0.16
SMAD6O43541 RN7SL692P-201ENST00000464677 288 ntBASIC16.02■□□□□ 0.16
SMAD6O43541 SLED1-202ENST00000512051 380 ntBASIC16.02■□□□□ 0.16
SMAD6O43541 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.02■□□□□ 0.16
SMAD6O43541 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.02■□□□□ 0.16
SMAD6O43541 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.02■□□□□ 0.16
SMAD6O43541 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SMAD6O43541 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.02■□□□□ 0.16
SMAD6O43541 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.02■□□□□ 0.16
SMAD6O43541 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.02■□□□□ 0.16
SMAD6O43541 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SMAD6O43541 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.02■□□□□ 0.16
SMAD6O43541 AL158212.4-201ENST00000624062 1286 ntBASIC16.02■□□□□ 0.16
SMAD6O43541 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SMAD6O43541 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SMAD6O43541 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SMAD6O43541 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SMAD6O43541 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SMAD6O43541 CLK3P2-201ENST00000427566 1453 ntBASIC16.02■□□□□ 0.15
SMAD6O43541 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SMAD6O43541 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.02■□□□□ 0.15
SMAD6O43541 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SMAD6O43541 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
SMAD6O43541 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SMAD6O43541 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.01■□□□□ 0.15
SMAD6O43541 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.01■□□□□ 0.15
SMAD6O43541 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.01■□□□□ 0.15
SMAD6O43541 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD6O43541 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SMAD6O43541 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.01■□□□□ 0.15
SMAD6O43541 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.01■□□□□ 0.15
SMAD6O43541 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD6O43541 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD6O43541 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.01■□□□□ 0.15
SMAD6O43541 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD6O43541 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD6O43541 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD6O43541 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD6O43541 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.01■□□□□ 0.15
SMAD6O43541 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SMAD6O43541 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD6O43541 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.01■□□□□ 0.15
SMAD6O43541 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD6O43541 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.01■□□□□ 0.15
SMAD6O43541 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD6O43541 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD6O43541 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD6O43541 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD6O43541 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.01■□□□□ 0.15
SMAD6O43541 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.01■□□□□ 0.15
SMAD6O43541 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.01■□□□□ 0.15
SMAD6O43541 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD6O43541 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.01■□□□□ 0.15
SMAD6O43541 AC123567.1-201ENST00000548294 1261 ntBASIC16.01■□□□□ 0.15
SMAD6O43541 AC005225.4-201ENST00000557330 545 ntBASIC16.01■□□□□ 0.15
SMAD6O43541 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.01■□□□□ 0.15
SMAD6O43541 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.01■□□□□ 0.15
SMAD6O43541 AC027307.3-201ENST00000594262 1100 ntBASIC16.01■□□□□ 0.15
SMAD6O43541 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.01■□□□□ 0.15
SMAD6O43541 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.01■□□□□ 0.15
SMAD6O43541 AC099568.2-201ENST00000609194 695 ntBASIC16.01■□□□□ 0.15
SMAD6O43541 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.01■□□□□ 0.15
SMAD6O43541 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
SMAD6O43541 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD6O43541 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD6O43541 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD6O43541 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.01■□□□□ 0.15
SMAD6O43541 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SMAD6O43541 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD6O43541 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.01■□□□□ 0.15
SMAD6O43541 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD6O43541 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.01■□□□□ 0.15
SMAD6O43541 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMAD6O43541 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16■□□□□ 0.15
SMAD6O43541 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16■□□□□ 0.15
SMAD6O43541 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
SMAD6O43541 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SMAD6O43541 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SMAD6O43541 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
SMAD6O43541 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SMAD6O43541 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SMAD6O43541 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16■□□□□ 0.15
SMAD6O43541 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SMAD6O43541 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SMAD6O43541 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
SMAD6O43541 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SMAD6O43541 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SMAD6O43541 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
SMAD6O43541 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SMAD6O43541 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16■□□□□ 0.15
SMAD6O43541 MYCLP2-201ENST00000449268 967 ntBASIC16■□□□□ 0.15
SMAD6O43541 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16■□□□□ 0.15
SMAD6O43541 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SMAD6O43541 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16■□□□□ 0.15
SMAD6O43541 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms