Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 DOC2GP-204ENST00000639052 2548 ntBASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 AL353779.1-201ENST00000434793 351 ntBASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA2E9PIF3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NPIPA2E9PIF3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
NPIPA2E9PIF3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
NPIPA2E9PIF3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.52□□□□□ -0.08
NPIPA2E9PIF3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.52□□□□□ -0.08
NPIPA2E9PIF3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
NPIPA2E9PIF3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
NPIPA2E9PIF3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NPIPA2E9PIF3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.52□□□□□ -0.08
NPIPA2E9PIF3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
NPIPA2E9PIF3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NPIPA2E9PIF3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
NPIPA2E9PIF3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
NPIPA2E9PIF3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
NPIPA2E9PIF3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms