Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP17L11C9JVI0 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.38■□□□□ 0.53
USP17L11C9JVI0 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.38■□□□□ 0.53
USP17L11C9JVI0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.38■□□□□ 0.53
USP17L11C9JVI0 TDH-203ENST00000531764 1110 ntBASIC18.38■□□□□ 0.53
USP17L11C9JVI0 ENPP7P5-201ENST00000541031 1031 ntBASIC18.38■□□□□ 0.53
USP17L11C9JVI0 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.38■□□□□ 0.53
USP17L11C9JVI0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.38■□□□□ 0.53
USP17L11C9JVI0 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.38■□□□□ 0.53
USP17L11C9JVI0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
USP17L11C9JVI0 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP17L11C9JVI0 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
USP17L11C9JVI0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP17L11C9JVI0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP17L11C9JVI0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP17L11C9JVI0 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP17L11C9JVI0 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.38■□□□□ 0.53
USP17L11C9JVI0 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP17L11C9JVI0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP17L11C9JVI0 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP17L11C9JVI0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP17L11C9JVI0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP17L11C9JVI0 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.37■□□□□ 0.53
USP17L11C9JVI0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 HAUS4P1-201ENST00000406739 1145 ntBASIC18.37■□□□□ 0.53
USP17L11C9JVI0 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 AC134915.1-201ENST00000426461 574 ntBASIC18.37■□□□□ 0.53
USP17L11C9JVI0 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP17L11C9JVI0 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 BNIP3P42-201ENST00000454982 569 ntBASIC18.36■□□□□ 0.53
USP17L11C9JVI0 RPL13AP25-201ENST00000484130 612 ntBASIC18.36■□□□□ 0.53
USP17L11C9JVI0 SLED1-202ENST00000512051 380 ntBASIC18.36■□□□□ 0.53
USP17L11C9JVI0 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 BNIP3P29-201ENST00000598302 571 ntBASIC18.36■□□□□ 0.53
USP17L11C9JVI0 AL022328.1-201ENST00000610050 478 ntBASIC18.36■□□□□ 0.53
USP17L11C9JVI0 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.36■□□□□ 0.53
USP17L11C9JVI0 AC011447.5-201ENST00000616168 564 ntBASIC18.36■□□□□ 0.53
USP17L11C9JVI0 MTHFR-217ENST00000641820 1569 ntBASIC18.36■□□□□ 0.53
USP17L11C9JVI0 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.35■□□□□ 0.53
USP17L11C9JVI0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms