Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 HPGD-203ENST00000422112 805 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 ISCA2P1-201ENST00000425548 448 ntBASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 CHMP1AP1-201ENST00000445563 662 ntBASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 BUD31-205ENST00000456893 512 ntTSL 5 BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 TUBB8P8-201ENST00000458717 1058 ntBASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 AC103810.10-201ENST00000606504 343 ntBASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 MIR6842-201ENST00000612539 65 ntBASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 AC051619.9-201ENST00000623237 597 ntBASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 AC127024.7-201ENST00000625101 200 ntBASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.16■□□□□ 0.5
TMEM88BA6NKF7 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC18.15■□□□□ 0.5
TMEM88BA6NKF7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM88BA6NKF7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM88BA6NKF7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM88BA6NKF7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
TMEM88BA6NKF7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.15■□□□□ 0.5
TMEM88BA6NKF7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM88BA6NKF7 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM88BA6NKF7 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TMEM88BA6NKF7 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TMEM88BA6NKF7 RPS9P1-201ENST00000419943 583 ntBASIC18.15■□□□□ 0.5
TMEM88BA6NKF7 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC18.15■□□□□ 0.5
TMEM88BA6NKF7 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC18.15■□□□□ 0.5
TMEM88BA6NKF7 YRDCP1-201ENST00000621419 643 ntBASIC18.15■□□□□ 0.5
TMEM88BA6NKF7 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC18.15■□□□□ 0.5
TMEM88BA6NKF7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.15■□□□□ 0.5
TMEM88BA6NKF7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM88BA6NKF7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM88BA6NKF7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM88BA6NKF7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.15■□□□□ 0.5
TMEM88BA6NKF7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM88BA6NKF7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.15■□□□□ 0.5
TMEM88BA6NKF7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.15■□□□□ 0.5
TMEM88BA6NKF7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM88BA6NKF7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM88BA6NKF7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.14■□□□□ 0.5
TMEM88BA6NKF7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.14■□□□□ 0.5
TMEM88BA6NKF7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
TMEM88BA6NKF7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.14■□□□□ 0.5
TMEM88BA6NKF7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TMEM88BA6NKF7 AL603756.1-201ENST00000606511 2163 ntBASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 AC134043.2-201ENST00000624206 2238 ntBASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 AL627231.1-201ENST00000394467 1125 ntBASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 FAU-202ENST00000434372 533 ntTSL 2 BASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 AC079112.1-201ENST00000454972 939 ntBASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 IGHV3-37-201ENST00000518544 340 ntBASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 AC090857.1-201ENST00000527400 390 ntBASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 AP002803.1-201ENST00000528836 498 ntBASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 MIR4649-201ENST00000582839 64 ntBASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 AL136295.7-201ENST00000619226 1200 ntBASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 AC068587.8-201ENST00000641239 219 ntBASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 TBC1D3J-201ENST00000620719 1426 ntBASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 AP001282.1-201ENST00000531301 1499 ntBASIC18.14■□□□□ 0.49
TMEM88BA6NKF7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms