Protein–RNA interactions for Protein: A6NHP3

SPDYE2B, Speedy protein E2B, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE2BA6NHP3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPDYE2BA6NHP3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPDYE2BA6NHP3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPDYE2BA6NHP3 CCNT2P1-201ENST00000423082 1315 ntBASIC18.91■□□□□ 0.62
SPDYE2BA6NHP3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPDYE2BA6NHP3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SPDYE2BA6NHP3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SPDYE2BA6NHP3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPDYE2BA6NHP3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SPDYE2BA6NHP3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPDYE2BA6NHP3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPDYE2BA6NHP3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.91■□□□□ 0.62
SPDYE2BA6NHP3 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SPDYE2BA6NHP3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPDYE2BA6NHP3 AC008033.3-201ENST00000612531 1407 ntBASIC18.91■□□□□ 0.62
SPDYE2BA6NHP3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPDYE2BA6NHP3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPDYE2BA6NHP3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 AC019070.1-201ENST00000415008 1024 ntBASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 AC012441.1-201ENST00000446669 685 ntBASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 FTH1P14-201ENST00000482930 551 ntBASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 BNIP3P39-201ENST00000601077 554 ntBASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 AC000095.1-201ENST00000603208 874 ntBASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 AL450472.2-201ENST00000603663 1156 ntBASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 AL138960.2-201ENST00000625145 535 ntBASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 KRT8P44-201ENST00000441609 1350 ntBASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 AC026471.1-201ENST00000564629 3026 ntBASIC18.9■□□□□ 0.62
SPDYE2BA6NHP3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SPDYE2BA6NHP3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SPDYE2BA6NHP3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.89■□□□□ 0.62
SPDYE2BA6NHP3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.89■□□□□ 0.62
SPDYE2BA6NHP3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 GCNT6-201ENST00000379591 934 ntBASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 BRWD1P1-201ENST00000401091 371 ntBASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 HAUS4P1-201ENST00000406739 1145 ntBASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 RPS3AP29-201ENST00000437728 769 ntBASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 AC106760.1-201ENST00000508690 800 ntBASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 AP001063.1-201ENST00000568332 529 ntBASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 AC097359.3-201ENST00000603982 1210 ntBASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 AC097065.2-201ENST00000608159 533 ntBASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 AC134312.5-201ENST00000568031 1313 ntBASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 GPALPP1-203ENST00000379151 1393 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.89■□□□□ 0.61
SPDYE2BA6NHP3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPDYE2BA6NHP3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPDYE2BA6NHP3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.88■□□□□ 0.61
SPDYE2BA6NHP3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPDYE2BA6NHP3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SPDYE2BA6NHP3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.88■□□□□ 0.61
SPDYE2BA6NHP3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPDYE2BA6NHP3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPDYE2BA6NHP3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.88■□□□□ 0.61
SPDYE2BA6NHP3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPDYE2BA6NHP3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPDYE2BA6NHP3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms