Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 MIR4515-201ENST00000584082 81 ntBASIC11.23□□□□□ -0.61
LINC01546A6NGU7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 AC015656.1-201ENST00000624209 3578 ntBASIC11.23□□□□□ -0.61
LINC01546A6NGU7 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 AP001267.2-201ENST00000532619 2086 ntBASIC11.23□□□□□ -0.61
LINC01546A6NGU7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 LINC01230-201ENST00000625222 3017 ntBASIC11.22□□□□□ -0.61
LINC01546A6NGU7 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 MST1P2-201ENST00000457982 2291 ntBASIC11.22□□□□□ -0.61
LINC01546A6NGU7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 AC106795.1-205ENST00000512851 1056 ntBASIC11.22□□□□□ -0.61
LINC01546A6NGU7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 TPSP2-201ENST00000561760 610 ntBASIC11.22□□□□□ -0.61
LINC01546A6NGU7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 AL691432.1-201ENST00000596308 1422 ntBASIC11.22□□□□□ -0.61
LINC01546A6NGU7 AC092329.2-201ENST00000598402 547 ntBASIC11.22□□□□□ -0.61
LINC01546A6NGU7 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 AP001269.4-201ENST00000609611 512 ntBASIC11.22□□□□□ -0.61
LINC01546A6NGU7 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 AC016734.2-201ENST00000624325 1377 ntBASIC11.22□□□□□ -0.61
LINC01546A6NGU7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
LINC01546A6NGU7 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms