Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 MYCLP2-201ENST00000449268 967 ntBASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 SPDYE18-201ENST00000510091 1050 ntBASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 AC093726.1-201ENST00000608064 963 ntBASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 AC067930.6-201ENST00000623257 4947 ntBASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2IPQ9Y2D8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 AC017083.2-201ENST00000608069 979 ntBASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 IGHV3-72-202ENST00000621503 303 ntBASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
SSX2IPQ9Y2D8 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.15■□□□□ 0.34
SSX2IPQ9Y2D8 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms