Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 SLC25A1P3-201ENST00000395415 828 ntBASIC15.2■□□□□ 0.02
LHX6Q9UPM6 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.2■□□□□ 0.02
LHX6Q9UPM6 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 AC018635.1-201ENST00000468292 1030 ntBASIC15.2■□□□□ 0.02
LHX6Q9UPM6 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 TDH-203ENST00000531764 1110 ntBASIC15.2■□□□□ 0.02
LHX6Q9UPM6 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 AP001793.2-201ENST00000580267 780 ntTSL 2 BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 AC020658.4-201ENST00000613987 684 ntBASIC15.2■□□□□ 0.02
LHX6Q9UPM6 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 AD000864.1-201ENST00000624076 2295 ntBASIC15.2■□□□□ 0.02
LHX6Q9UPM6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 MTND1P26-201ENST00000440488 538 ntBASIC15.19■□□□□ 0.02
LHX6Q9UPM6 EAF2-202ENST00000451944 960 ntTSL 2 BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 AC114322.1-201ENST00000506771 926 ntBASIC15.19■□□□□ 0.02
LHX6Q9UPM6 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 MEG8-217ENST00000556637 924 ntTSL 5 BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 AC020765.3-201ENST00000613051 740 ntBASIC15.19■□□□□ 0.02
LHX6Q9UPM6 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 AL033527.5-202ENST00000641632 1098 ntBASIC15.19■□□□□ 0.02
LHX6Q9UPM6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 NKILA-202ENST00000614771 2598 ntBASIC15.19■□□□□ 0.02
LHX6Q9UPM6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LHX6Q9UPM6 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 AC092978.1-202ENST00000637590 1327 ntBASIC15.18■□□□□ 0.02
LHX6Q9UPM6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms