Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 AL589702.1-201ENST00000641229 1509 ntBASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 AC007541.1-201ENST00000570282 1469 ntBASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA1Q9UND3 AL596087.1-201ENST00000400979 1969 ntBASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 AL080243.2-201ENST00000418783 582 ntBASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 RN7SL618P-201ENST00000477850 296 ntBASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 REXO1L8P-201ENST00000604378 1897 ntBASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA1Q9UND3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA1Q9UND3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.73□□□□□ -0.05
NPIPA1Q9UND3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
NPIPA1Q9UND3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
NPIPA1Q9UND3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
NPIPA1Q9UND3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
NPIPA1Q9UND3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA1Q9UND3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA1Q9UND3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.73□□□□□ -0.05
NPIPA1Q9UND3 AC005622.1-201ENST00000636801 1703 ntBASIC14.73□□□□□ -0.05
NPIPA1Q9UND3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA1Q9UND3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA1Q9UND3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA1Q9UND3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA1Q9UND3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
NPIPA1Q9UND3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms