Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 AC211486.1-202ENST00000416371 468 ntBASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 CEND1P1-201ENST00000451006 455 ntBASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 AC211476.1-201ENST00000503899 468 ntBASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 CICP4-201ENST00000447359 2812 ntBASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 AC104581.4-201ENST00000623126 3052 ntBASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 AC008677.1-201ENST00000519230 1561 ntBASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CNOT11Q9UKZ1 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 AL592424.1-201ENST00000563624 1536 ntBASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 RNU1-129P-201ENST00000384064 167 ntBASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 AP006288.1-201ENST00000446065 395 ntBASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 U1.21-201ENST00000580816 167 ntBASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 AL009183.1-201ENST00000603760 355 ntBASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 AL031055.1-201ENST00000606362 631 ntBASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 AC099522.2-201ENST00000607001 744 ntBASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CNOT11Q9UKZ1 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms