Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 AC120045.2-201ENST00000567334 178 ntBASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 AC107373.2-201ENST00000607735 490 ntBASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 AC112693.3-201ENST00000624819 1983 ntBASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
NPC1L1Q9UHC9 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC21.14■□□□□ 0.98
NPC1L1Q9UHC9 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NPC1L1Q9UHC9 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NPC1L1Q9UHC9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NPC1L1Q9UHC9 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NPC1L1Q9UHC9 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NPC1L1Q9UHC9 GHSR-202ENST00000427970 912 ntBASIC21.14■□□□□ 0.98
NPC1L1Q9UHC9 VDAC1P7-201ENST00000462417 847 ntBASIC21.14■□□□□ 0.98
NPC1L1Q9UHC9 TAF8-206ENST00000472818 719 ntTSL 2 BASIC21.14■□□□□ 0.98
NPC1L1Q9UHC9 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC21.14■□□□□ 0.98
NPC1L1Q9UHC9 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NPC1L1Q9UHC9 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC21.14■□□□□ 0.98
NPC1L1Q9UHC9 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NPC1L1Q9UHC9 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC21.14■□□□□ 0.98
NPC1L1Q9UHC9 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC21.14■□□□□ 0.98
NPC1L1Q9UHC9 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
NPC1L1Q9UHC9 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC21.14■□□□□ 0.98
NPC1L1Q9UHC9 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC21.14■□□□□ 0.98
NPC1L1Q9UHC9 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
NPC1L1Q9UHC9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NPC1L1Q9UHC9 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
NPC1L1Q9UHC9 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NPC1L1Q9UHC9 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC21.14■□□□□ 0.97
NPC1L1Q9UHC9 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC21.14■□□□□ 0.97
NPC1L1Q9UHC9 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC21.14■□□□□ 0.97
NPC1L1Q9UHC9 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
NPC1L1Q9UHC9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
NPC1L1Q9UHC9 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NPC1L1Q9UHC9 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC21.14■□□□□ 0.97
NPC1L1Q9UHC9 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NPC1L1Q9UHC9 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NPC1L1Q9UHC9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NPC1L1Q9UHC9 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC21.14■□□□□ 0.97
NPC1L1Q9UHC9 AGER-206ENST00000375070 1463 ntTSL 5 BASIC21.14■□□□□ 0.97
NPC1L1Q9UHC9 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NPC1L1Q9UHC9 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NPC1L1Q9UHC9 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC21.14■□□□□ 0.97
NPC1L1Q9UHC9 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 KRT8P44-201ENST00000441609 1350 ntBASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 PNKD-204ENST00000436005 978 ntTSL 5 BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 AP005018.1-201ENST00000525475 301 ntBASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 WFDC1-204ENST00000613603 549 ntBASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 SSR4P1-203ENST00000599569 2260 ntBASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NPC1L1Q9UHC9 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NPC1L1Q9UHC9 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
NPC1L1Q9UHC9 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NPC1L1Q9UHC9 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NPC1L1Q9UHC9 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC21.12■□□□□ 0.97
NPC1L1Q9UHC9 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NPC1L1Q9UHC9 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms